RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 MTMR2Q13614 643 aa13.28□□□□□ -0.28
FAM60A-206ENST00000539409 ZYXQ15942 572 aaKnown RBP13.28□□□□□ -0.28
FAM60A-206ENST00000539409 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
FAM60A-206ENST00000539409 SPICE1Q8N0Z3 855 aa13.28□□□□□ -0.28
FAM60A-206ENST00000539409 ZNF280CQ8ND82 737 aa13.28□□□□□ -0.28
FAM60A-206ENST00000539409 AS3MTQ9HBK9 375 aa13.28□□□□□ -0.28
FAM60A-206ENST00000539409 KLRF2D3W0D1 207 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 UBE2Q2LH0YL09 131 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.29
FAM60A-206ENST00000539409 SLC1A4P43007 532 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 GNAQP50148 359 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 SPP2Q13103 211 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 CCDC96Q2M329 555 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 GPATCH4Q5T3I0 446 aaKnown RBP13.27□□□□□ -0.29
FAM60A-206ENST00000539409 KCTD1Q719H9 257 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 NUP88Q99567 741 aaPredicted RBP13.27□□□□□ -0.29
FAM60A-206ENST00000539409 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 CPVLQ9H3G5 476 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.29
FAM60A-206ENST00000539409 PTPRFP10586 1907 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 MYH6P13533 1939 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 USP17L10C9JJH3 530 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 CYTH3O43739 400 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 FKBP1BP68106 108 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 RNF26Q9BY78 433 aaPredicted RBP13.27□□□□□ -0.29
FAM60A-206ENST00000539409 ELP3Q9H9T3 547 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 GBA2Q9HCG7 927 aaPredicted RBP13.27□□□□□ -0.29
FAM60A-206ENST00000539409 GPCPD1Q9NPB8 672 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 AFG3L2Q9Y4W6 797 aa13.27□□□□□ -0.29
FAM60A-206ENST00000539409 TRIM75PA6NK02 468 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 BACE1P56817 501 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 SSRP1Q08945 709 aaKnown RBP13.26□□□□□ -0.29
FAM60A-206ENST00000539409 DGKZQ13574 1117 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 CST9Q5W186 159 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 SPZ1Q9BXG8 430 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 BAZ2BQ9UIF8 2168 aaKnown RBP13.26□□□□□ -0.29
FAM60A-206ENST00000539409 SPDYE5A6NIY4 337 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 BMP3P12645 472 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 TTBK2Q6IQ55 1244 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 LPAR1Q92633 364 aa13.26□□□□□ -0.29
FAM60A-206ENST00000539409 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
FAM60A-206ENST00000539409 UNCXA6NJT0 531 aa13.25□□□□□ -0.29
FAM60A-206ENST00000539409 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
FAM60A-206ENST00000539409 PKP1Q13835 747 aa13.25□□□□□ -0.29
FAM60A-206ENST00000539409 ERO1BQ86YB8 467 aa13.25□□□□□ -0.29
FAM60A-206ENST00000539409 UBA5Q9GZZ9 404 aa13.25□□□□□ -0.29
FAM60A-206ENST00000539409 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
FAM60A-206ENST00000539409 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
FAM60A-206ENST00000539409 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
FAM60A-206ENST00000539409 hCG_1642624A0A1W2PR95 340 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 PRPF3O43395 683 aaKnown RBP13.24□□□□□ -0.29
FAM60A-206ENST00000539409 DEXIO95424 95 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 SYT1P21579 422 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 USP14P54578 494 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 PPATQ06203 517 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 FAM83BQ5T0W9 1011 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 C2orf69Q8N8R5 385 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 ISY1Q9ULR0 285 aaKnown RBP13.24□□□□□ -0.29
FAM60A-206ENST00000539409 KIF3AQ9Y496 699 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
FAM60A-206ENST00000539409 LOC285556D6RIA3 1793 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 SLC16A2P36021 539 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 PKN1Q16512 942 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 RIOX1Q9H6W3 641 aa13.24□□□□□ -0.29
FAM60A-206ENST00000539409 WDR46O15213 610 aaKnown RBP13.23□□□□□ -0.29
FAM60A-206ENST00000539409 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
FAM60A-206ENST00000539409 VCAM1P19320 739 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 PDCP20941 246 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 YY1P25490 414 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 HMGCS2P54868 508 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 LARP1BQ659C4 914 aaKnown RBP13.23□□□□□ -0.29
FAM60A-206ENST00000539409 SMC1BQ8NDV3 1235 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 OPTNQ96CV9 577 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 C12orf42Q96LP6 360 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 C19orf81C9J6K1 198 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 TMEM232C9JQI7 657 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 IRF6O14896 467 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
FAM60A-206ENST00000539409 PPIL2Q13356 520 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 BTNL9Q6UXG8 535 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 ADGRF4Q8IZF3 695 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
FAM60A-206ENST00000539409 PIBF1Q8WXW3 757 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 ALG1Q9BT22 464 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
FAM60A-206ENST00000539409 PARP14Q460N5 1801 aa13.23□□□□□ -0.29
FAM60A-206ENST00000539409 STX6O43752 255 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 SH3D19Q5HYK7 790 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
FAM60A-206ENST00000539409 WASF1Q92558 559 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 JMJD4Q9H9V9 463 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
FAM60A-206ENST00000539409 GJA5P36382 358 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms