RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 SHHQ15465 462 aa25.69■■□□□ 1.7
SSH3-211ENST00000534112 FAM47AQ5JRC9 791 aa25.69■■□□□ 1.7
SSH3-211ENST00000534112 FERMT2Q96AC1 680 aa25.69■■□□□ 1.7
SSH3-211ENST00000534112 EEF2P13639 858 aaKnown RBP25.68■■□□□ 1.7
SSH3-211ENST00000534112 ATP5JP18859 108 aa25.68■■□□□ 1.7
SSH3-211ENST00000534112 C16orf86Q6ZW13 317 aa25.68■■□□□ 1.7
SSH3-211ENST00000534112 AMOTL1Q8IY63 956 aa25.68■■□□□ 1.7
SSH3-211ENST00000534112 BADQ92934 168 aa25.68■■□□□ 1.7
SSH3-211ENST00000534112 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.68■■□□□ 1.7
SSH3-211ENST00000534112 ZBTB40Q9NUA8 1239 aa25.68■■□□□ 1.7
SSH3-211ENST00000534112 CHGBP05060 677 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 C9orf50Q5SZB4 431 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 ZNF697Q5TEC3 545 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 C1orf53Q5VUE5 145 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 MMP19Q99542 508 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 HAUS7Q99871 368 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 KANSL2Q9H9L4 492 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 PDLIM7Q9NR12 457 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 FBXO28Q9NVF7 368 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 NRBP1Q9UHY1 535 aa25.67■■□□□ 1.7
SSH3-211ENST00000534112 A0A0G2JMZ2 1700 aa25.66■■□□□ 1.7
SSH3-211ENST00000534112 PGK2P07205 417 aa25.66■■□□□ 1.7
SSH3-211ENST00000534112 UBE3CQ15386 1083 aa25.66■■□□□ 1.7
SSH3-211ENST00000534112 SH3RF1Q7Z6J0 888 aa25.66■■□□□ 1.7
SSH3-211ENST00000534112 RIOX2Q8IUF8 465 aa25.66■■□□□ 1.7
SSH3-211ENST00000534112 DDRGK1Q96HY6 314 aa25.66■■□□□ 1.7
SSH3-211ENST00000534112 TRIM43BA6NCK2 446 aa25.65■■□□□ 1.7
SSH3-211ENST00000534112 RARBP10826 455 aa25.65■■□□□ 1.7
SSH3-211ENST00000534112 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.65■■□□□ 1.7
SSH3-211ENST00000534112 TRIM43Q96BQ3 446 aaPredicted RBP25.65■■□□□ 1.7
SSH3-211ENST00000534112 TINF2Q9BSI4 451 aa25.65■■□□□ 1.7
SSH3-211ENST00000534112 XPNPEP3Q9NQH7 507 aa25.65■■□□□ 1.7
SSH3-211ENST00000534112 DDX19BQ9UMR2 479 aa25.65■■□□□ 1.7
SSH3-211ENST00000534112 PHF24Q9UPV7 400 aa25.65■■□□□ 1.7
SSH3-211ENST00000534112 COG6Q9Y2V7 657 aa25.65■■□□□ 1.7
SSH3-211ENST00000534112 SLC4A4Q9Y6R1 1079 aa25.65■■□□□ 1.7
SSH3-211ENST00000534112 VWA5AO00534 786 aa25.64■■□□□ 1.7
SSH3-211ENST00000534112 STAT3P40763 770 aa25.64■■□□□ 1.7
SSH3-211ENST00000534112 TLE2Q04725 743 aa25.64■■□□□ 1.7
SSH3-211ENST00000534112 KCTD2Q14681 263 aa25.64■■□□□ 1.7
SSH3-211ENST00000534112 CTR9Q6PD62 1173 aa25.64■■□□□ 1.7
SSH3-211ENST00000534112 PPP1R9AQ9ULJ8 1098 aa25.64■■□□□ 1.7
SSH3-211ENST00000534112 DIS3Q9Y2L1 958 aaKnown RBP25.64■■□□□ 1.7
SSH3-211ENST00000534112 ZNF792Q3KQV3 632 aa25.63■■□□□ 1.69
SSH3-211ENST00000534112 MIER1Q8N108 512 aa25.63■■□□□ 1.69
SSH3-211ENST00000534112 COL25A1Q9BXS0 654 aaPredicted RBP25.63■■□□□ 1.69
SSH3-211ENST00000534112 GOPCQ9HD26 462 aa25.63■■□□□ 1.69
SSH3-211ENST00000534112 ZBED9Q6R2W3 1325 aa25.63■■□□□ 1.69
SSH3-211ENST00000534112 PGK1P00558 417 aa25.62■■□□□ 1.69
SSH3-211ENST00000534112 TAL1P17542 331 aaPredicted RBP25.62■■□□□ 1.69
SSH3-211ENST00000534112 FAM83BQ5T0W9 1011 aa25.62■■□□□ 1.69
SSH3-211ENST00000534112 RNF180Q86T96 592 aa25.62■■□□□ 1.69
SSH3-211ENST00000534112 CDX2Q99626 313 aaPredicted RBP25.62■■□□□ 1.69
SSH3-211ENST00000534112 PUS7LQ9H0K6 701 aaKnown RBP25.62■■□□□ 1.69
SSH3-211ENST00000534112 SEMA6BQ9H3T3 888 aa25.62■■□□□ 1.69
SSH3-211ENST00000534112 ZNF214Q9UL59 606 aaPredicted RBP25.62■■□□□ 1.69
SSH3-211ENST00000534112 TACC3Q9Y6A5 838 aa25.62■■□□□ 1.69
SSH3-211ENST00000534112 RAD21O60216 631 aa25.61■■□□□ 1.69
SSH3-211ENST00000534112 REPS2Q8NFH8 660 aa25.61■■□□□ 1.69
SSH3-211ENST00000534112 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.61■■□□□ 1.69
SSH3-211ENST00000534112 VCANP13611 3396 aa25.61■■□□□ 1.69
SSH3-211ENST00000534112 ZNF865P0CJ78 1059 aaPredicted RBP25.6■■□□□ 1.69
SSH3-211ENST00000534112 ITGB8P26012 769 aa25.6■■□□□ 1.69
SSH3-211ENST00000534112 COPB2P35606 906 aa25.6■■□□□ 1.69
SSH3-211ENST00000534112 SMAD3P84022 425 aaKnown RBP25.6■■□□□ 1.69
SSH3-211ENST00000534112 ZSCAN25Q6NSZ9 544 aa25.6■■□□□ 1.69
SSH3-211ENST00000534112 LTBP2Q14767 1821 aa25.6■■□□□ 1.69
SSH3-211ENST00000534112 EYSQ5T1H1 3165 aa25.6■■□□□ 1.69
SSH3-211ENST00000534112 CLTBP09497 229 aa25.58■■□□□ 1.69
SSH3-211ENST00000534112 AKR1A1P14550 325 aa25.58■■□□□ 1.69
SSH3-211ENST00000534112 ARPP21Q9UBL0 812 aaPredicted RBP25.58■■□□□ 1.69
SSH3-211ENST00000534112 CNPY2Q9Y2B0 182 aa25.58■■□□□ 1.69
SSH3-211ENST00000534112 CDH23Q9H251 3354 aa25.58■■□□□ 1.68
SSH3-211ENST00000534112 A0A1W2PQ45 241 aaPredicted RBP25.57■■□□□ 1.68
SSH3-211ENST00000534112 A0A1W2PQY0 241 aa25.57■■□□□ 1.68
SSH3-211ENST00000534112 LENG1Q96BZ8 264 aaPredicted RBP25.57■■□□□ 1.68
SSH3-211ENST00000534112 STRBPQ96SI9 672 aaKnown RBP25.57■■□□□ 1.68
SSH3-211ENST00000534112 NUP88Q99567 741 aaPredicted RBP25.57■■□□□ 1.68
SSH3-211ENST00000534112 SLF1Q9BQI6 1058 aa25.57■■□□□ 1.68
SSH3-211ENST00000534112 TTYH1Q9H313 450 aaPredicted RBP25.57■■□□□ 1.68
SSH3-211ENST00000534112 CHMP4BQ9H444 224 aaKnown RBP25.57■■□□□ 1.68
SSH3-211ENST00000534112 SMCHD1A6NHR9 2005 aa25.57■■□□□ 1.68
SSH3-211ENST00000534112 BAZ2AQ9UIF9 1905 aaKnown RBP25.57■■□□□ 1.68
SSH3-211ENST00000534112 ROBO3Q96MS0 1386 aa25.56■■□□□ 1.68
SSH3-211ENST00000534112 KIAA0355O15063 1070 aa25.56■■□□□ 1.68
SSH3-211ENST00000534112 PQBP1O60828 265 aaKnown RBP25.56■■□□□ 1.68
SSH3-211ENST00000534112 TEX13BQ9BXU2 312 aa25.56■■□□□ 1.68
SSH3-211ENST00000534112 ADAMTS4O75173 837 aa25.55■■□□□ 1.68
SSH3-211ENST00000534112 RASA1P20936 1047 aa25.55■■□□□ 1.68
SSH3-211ENST00000534112 EPHB4P54760 987 aa25.55■■□□□ 1.68
SSH3-211ENST00000534112 SBK1Q52WX2 424 aa25.55■■□□□ 1.68
SSH3-211ENST00000534112 MSL3Q8N5Y2 521 aaKnown RBP25.55■■□□□ 1.68
SSH3-211ENST00000534112 TSEN34Q9BSV6 310 aaKnown RBP25.55■■□□□ 1.68
SSH3-211ENST00000534112 LRRCC1Q9C099 1032 aa25.55■■□□□ 1.68
SSH3-211ENST00000534112 NYAP2Q9P242 653 aa25.55■■□□□ 1.68
SSH3-211ENST00000534112 PRUNE2Q8WUY3 3088 aa25.55■■□□□ 1.68
SSH3-211ENST00000534112 F5H6K3 240 aa25.54■■□□□ 1.68
SSH3-211ENST00000534112 SMARCA5O60264 1052 aaPredicted RBP25.54■■□□□ 1.68
SSH3-211ENST00000534112 RAG1P15918 1043 aa25.54■■□□□ 1.68
SSH3-211ENST00000534112 KLRC3Q07444 240 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms