RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 TFAP4Q01664 338 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 PLS1Q14651 629 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 ANO1Q5XXA6 986 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 GIMAP6Q6P9H5 292 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 EVI5LQ96CN4 794 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 SPATC1LQ9H0A9 340 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
SSBP3-215ENST00000533946 ADAMTS5Q9UNA0 930 aa11.51□□□□□ -0.57
SSBP3-215ENST00000533946 TRIOBPQ9H2D6 2365 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 TRIM6-TRIM34B2RNG4 842 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 F5H6K3 240 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 FGAP02671 866 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 TFRCP02786 760 aaKnown RBP11.5□□□□□ -0.57
SSBP3-215ENST00000533946 HMGCRP04035 888 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 PGK2P07205 417 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 UBXN2AP68543 259 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 KLRC3Q07444 240 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 PRPF38BQ5VTL8 546 aaKnown RBP11.5□□□□□ -0.57
SSBP3-215ENST00000533946 LHX8Q68G74 356 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 TBC1D10CQ8IV04 446 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 PAWRQ96IZ0 340 aaKnown RBP11.5□□□□□ -0.57
SSBP3-215ENST00000533946 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 NAPBQ9H115 298 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 KANSL2Q9H9L4 492 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 ARHGEF10LQ9HCE6 1279 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 MTMR4Q9NYA4 1195 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 FRMPD3Q5JV73 1810 aa11.5□□□□□ -0.57
SSBP3-215ENST00000533946 FARP2O94887 1054 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-215ENST00000533946 HSPD1P10809 573 aaKnown RBP11.49□□□□□ -0.57
SSBP3-215ENST00000533946 SDSP20132 328 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 ADORA2AP29274 412 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 MAPK4P31152 587 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 GRB14Q14449 540 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 NEDD1Q8NHV4 660 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-215ENST00000533946 MTMR7Q9Y216 660 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 TAF6LQ9Y6J9 622 aa11.49□□□□□ -0.57
SSBP3-215ENST00000533946 VWA5AO00534 786 aa11.48□□□□□ -0.57
SSBP3-215ENST00000533946 WDR46O15213 610 aaKnown RBP11.48□□□□□ -0.57
SSBP3-215ENST00000533946 PTGS1P23219 599 aa11.48□□□□□ -0.57
SSBP3-215ENST00000533946 SLC4A3P48751 1232 aa11.48□□□□□ -0.57
SSBP3-215ENST00000533946 IRX5P78411 483 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-215ENST00000533946 COL9A3Q14050 684 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-215ENST00000533946 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
SSBP3-215ENST00000533946 CWC27Q6UX04 472 aaKnown RBP11.48□□□□□ -0.57
SSBP3-215ENST00000533946 NCAPG2Q86XI2 1143 aa11.48□□□□□ -0.57
SSBP3-215ENST00000533946 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-215ENST00000533946 LENG1Q96BZ8 264 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-215ENST00000533946 DDRGK1Q96HY6 314 aa11.48□□□□□ -0.57
SSBP3-215ENST00000533946 PPP1R9AQ9ULJ8 1098 aa11.48□□□□□ -0.57
SSBP3-215ENST00000533946 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-215ENST00000533946 PLXNA1Q9UIW2 1896 aa11.48□□□□□ -0.57
SSBP3-215ENST00000533946 MCM3APO60318 1980 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 PFASO15067 1338 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 NEDD4P46934 1319 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 RPTORQ8N122 1335 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 XRCC5P13010 732 aaKnown RBP11.47□□□□□ -0.57
SSBP3-215ENST00000533946 ZKSCAN1P17029 563 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-215ENST00000533946 GNAT2P19087 354 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 MCCP23508 829 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 RGS2P41220 211 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 MCMDC2Q4G0Z9 681 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 RRP12Q5JTH9 1297 aaKnown RBP11.47□□□□□ -0.57
SSBP3-215ENST00000533946 KCTD1Q719H9 257 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 CCAR1Q8IX12 1150 aaKnown RBP11.47□□□□□ -0.57
SSBP3-215ENST00000533946 AMOTL1Q8IY63 956 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 LPAR1Q92633 364 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 MKL1Q969V6 931 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 FGD4Q96M96 766 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 PURBQ96QR8 312 aaKnown RBP11.47□□□□□ -0.57
SSBP3-215ENST00000533946 APBA2Q99767 749 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 CPVLQ9H3G5 476 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 RAVER2Q9HCJ3 691 aaKnown RBP11.47□□□□□ -0.57
SSBP3-215ENST00000533946 HMX1Q9NP08 348 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-215ENST00000533946 HELLSQ9NRZ9 838 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
SSBP3-215ENST00000533946 RANBP6O60518 1105 aaKnown RBP11.46□□□□□ -0.57
SSBP3-215ENST00000533946 TSPY3P0CV98 308 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 TSPY8P0CW00 308 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 ALX1Q15699 326 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 SLFN13Q68D06 897 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 RCSD1Q6JBY9 416 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 CPXCR1Q8N123 301 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 DPF3Q92784 378 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 ZKSCAN3Q9BRR0 538 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 ANAPC4Q9UJX5 808 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 OGDHLQ9ULD0 1010 aa11.46□□□□□ -0.57
SSBP3-215ENST00000533946 LCTP09848 1927 aa11.45□□□□□ -0.58
SSBP3-215ENST00000533946 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
SSBP3-215ENST00000533946 ZNF536O15090 1300 aa11.45□□□□□ -0.58
SSBP3-215ENST00000533946 CCDC171Q6TFL3 1326 aa11.45□□□□□ -0.58
SSBP3-215ENST00000533946 ZNF236Q9UL36 1845 aa11.45□□□□□ -0.58
SSBP3-215ENST00000533946 HOXC6P09630 235 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms