RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 K7ELQ4 463 aaPredicted RBP20.57■□□□□ 0.88
CTSB-222ENST00000531551 VCAM1P19320 739 aa20.57■□□□□ 0.88
CTSB-222ENST00000531551 KIF5BP33176 963 aa20.57■□□□□ 0.88
CTSB-222ENST00000531551 ADD1P35611 737 aaKnown RBP20.57■□□□□ 0.88
CTSB-222ENST00000531551 SCRN1Q12765 414 aa20.57■□□□□ 0.88
CTSB-222ENST00000531551 IKQ13123 557 aaPredicted RBP20.57■□□□□ 0.88
CTSB-222ENST00000531551 GRM4Q14833 912 aa20.57■□□□□ 0.88
CTSB-222ENST00000531551 CYP4F22Q6NT55 531 aa20.57■□□□□ 0.88
CTSB-222ENST00000531551 SAMD1Q6SPF0 538 aaPredicted RBP20.57■□□□□ 0.88
CTSB-222ENST00000531551 PRRT2Q7Z6L0 340 aaPredicted RBP20.57■□□□□ 0.88
CTSB-222ENST00000531551 CCDC83Q8IWF9 413 aa20.57■□□□□ 0.88
CTSB-222ENST00000531551 STAG2Q8N3U4 1231 aa20.57■□□□□ 0.88
CTSB-222ENST00000531551 GMCL1Q96IK5 515 aa20.57■□□□□ 0.88
CTSB-222ENST00000531551 SH2B1Q9NRF2 756 aaPredicted RBP20.57■□□□□ 0.88
CTSB-222ENST00000531551 PFKFB2O60825 505 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 SNHG28P0DPA3 235 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 CDC27P30260 824 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 GTF2A2P52657 109 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 HTRA3P83110 453 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 DEFB115Q30KQ5 88 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 SH3D19Q5HYK7 790 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 CMTR1Q8N1G2 835 aaKnown RBP20.56■□□□□ 0.88
CTSB-222ENST00000531551 CCDC82Q8N4S0 544 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 CCDC102AQ96A19 550 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 MAD2L2Q9UI95 211 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 SLC10A3P09131 477 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 ZNF543Q08ER8 600 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 HHIPL1Q96JK4 782 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 TANGO6Q9C0B7 1094 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 RPAP3Q9H6T3 665 aaPredicted RBP20.56■□□□□ 0.88
CTSB-222ENST00000531551 MYH4Q9Y623 1939 aa20.56■□□□□ 0.88
CTSB-222ENST00000531551 CCL15-CCL14A0A0B4J2E2 113 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 TMEM232C9JQI7 657 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 CPLX1O14810 134 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 WDR46O15213 610 aaKnown RBP20.55■□□□□ 0.88
CTSB-222ENST00000531551 PPFIA3O75145 1194 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 RCAN1P53805 252 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 BECN1Q14457 450 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 CCL15Q16663 113 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 ASPRV1Q53RT3 343 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 TTBK2Q6IQ55 1244 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 GTF3C6Q969F1 213 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 C12orf42Q96LP6 360 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 MAP3K14Q99558 947 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 UBA5Q9GZZ9 404 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 CPVLQ9H3G5 476 aa20.55■□□□□ 0.88
CTSB-222ENST00000531551 RBM28Q9NW13 759 aaKnown RBP20.55■□□□□ 0.88
CTSB-222ENST00000531551 CCDC196A0A1B0GTZ2 297 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 KLRF2D3W0D1 207 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 DHX16O60231 1041 aaKnown RBP20.54■□□□□ 0.88
CTSB-222ENST00000531551 DTNBO60941 627 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 PLEKHA8P1O95397 391 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 CETPP11597 493 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 SLC16A2P36021 539 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 TREML2Q5T2D2 321 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 GPATCH4Q5T3I0 446 aaKnown RBP20.54■□□□□ 0.88
CTSB-222ENST00000531551 FASTKD5Q7L8L6 764 aaKnown RBP20.54■□□□□ 0.88
CTSB-222ENST00000531551 PHIPQ8WWQ0 1821 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 PALM3A6NDB9 673 aaPredicted RBP20.54■□□□□ 0.88
CTSB-222ENST00000531551 MS4A4AQ96JQ5 239 aa20.54■□□□□ 0.88
CTSB-222ENST00000531551 FAM217BQ9NTX9 383 aaPredicted RBP20.54■□□□□ 0.88
CTSB-222ENST00000531551 RASSF10A6NK89 507 aa20.53■□□□□ 0.88
CTSB-222ENST00000531551 FAM155AB1AL88 458 aaPredicted RBP20.53■□□□□ 0.88
CTSB-222ENST00000531551 PROCA1Q8NCQ7 364 aaPredicted RBP20.53■□□□□ 0.88
CTSB-222ENST00000531551 VAT1LQ9HCJ6 419 aa20.53■□□□□ 0.88
CTSB-222ENST00000531551 GNAQP50148 359 aa20.52■□□□□ 0.88
CTSB-222ENST00000531551 STAT2P52630 851 aa20.52■□□□□ 0.88
CTSB-222ENST00000531551 PPP2R5BQ15173 497 aa20.52■□□□□ 0.88
CTSB-222ENST00000531551 CPLX2Q6PUV4 134 aaKnown RBP20.52■□□□□ 0.88
CTSB-222ENST00000531551 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
CTSB-222ENST00000531551 PIBF1Q8WXW3 757 aa20.52■□□□□ 0.88
CTSB-222ENST00000531551 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.88
CTSB-222ENST00000531551 FBXO28Q9NVF7 368 aa20.52■□□□□ 0.88
CTSB-222ENST00000531551 FLOT1O75955 427 aa20.52■□□□□ 0.87
CTSB-222ENST00000531551 HSP90AA1P07900 732 aaKnown RBP20.52■□□□□ 0.87
CTSB-222ENST00000531551 C1QTNF8P60827 252 aa20.52■□□□□ 0.87
CTSB-222ENST00000531551 ST3GAL1Q11201 340 aa20.52■□□□□ 0.87
CTSB-222ENST00000531551 NBPF11Q86T75 865 aa20.52■□□□□ 0.87
CTSB-222ENST00000531551 SRBD1Q8N5C6 995 aaKnown RBP20.52■□□□□ 0.87
CTSB-222ENST00000531551 SPRYD3Q8NCJ5 442 aa20.52■□□□□ 0.87
CTSB-222ENST00000531551 BRI3BPQ8WY22 251 aa20.52■□□□□ 0.87
CTSB-222ENST00000531551 KIFC2Q96AC6 838 aa20.52■□□□□ 0.87
CTSB-222ENST00000531551 CAPNS2Q96L46 248 aa20.52■□□□□ 0.87
CTSB-222ENST00000531551 USP17L15C9J2P7 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 USP17L13C9JLJ4 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 USP17L11C9JVI0 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 USP17L18D6R9N7 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 USP17L22D6RA61 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 USP17L17D6RBQ6 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 USP17L19D6RCP7 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 USP17L20D6RJB6 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 USP17L24Q0WX57 530 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 MOGSQ13724 837 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 PHKBQ93100 1093 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 FEM1BQ9UK73 627 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 AGTPBP1Q9UPW5 1226 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 NID2Q14112 1375 aa20.51■□□□□ 0.87
CTSB-222ENST00000531551 MANSC4A6NHS7 340 aaPredicted RBP20.5■□□□□ 0.87
CTSB-222ENST00000531551 SLC4A3P48751 1232 aa20.5■□□□□ 0.87
CTSB-222ENST00000531551 CHURC1Q8WUH1 139 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms