RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 PDE8AO60658 829 aa17.33■□□□□ 0.37
PCDHA6-203ENST00000529310 KCNJ12Q14500 433 aa17.33■□□□□ 0.37
PCDHA6-203ENST00000529310 CCDC125Q86Z20 511 aa17.33■□□□□ 0.37
PCDHA6-203ENST00000529310 CDAN1Q8IWY9 1227 aa17.33■□□□□ 0.37
PCDHA6-203ENST00000529310 LSM14BQ9BX40 385 aaKnown RBP17.33■□□□□ 0.37
PCDHA6-203ENST00000529310 ZNF215Q9UL58 517 aaPredicted RBP17.33■□□□□ 0.37
PCDHA6-203ENST00000529310 TRPC5Q9UL62 973 aaPredicted RBP17.33■□□□□ 0.37
PCDHA6-203ENST00000529310 DDX39AO00148 427 aaKnown RBP17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 HIP1RO75146 1068 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 AATFQ9NY61 560 aaKnown RBP eCLIP17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 VPS54Q9P1Q0 977 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 KCNK3O14649 394 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 UFL1O94874 794 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 MAN1A1P33908 653 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 CERS3Q8IU89 383 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 DSCC1Q9BVC3 393 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 MYCLP12524 364 aaPredicted RBP17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 SLC1A4P43007 532 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 PPP2R5CQ13362 524 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 MAP3K21Q5TCX8 1036 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 CTAGE3PQ8IX95 158 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 FLAD1Q8NFF5 587 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 CAPS2Q9BXY5 557 aa17.33■□□□□ 0.36
PCDHA6-203ENST00000529310 KRIT1O00522 736 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 STAT1P42224 750 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 ETF1P62495 437 aaKnown RBP17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 SH2D4BQ5SQS7 431 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 SUCLG2Q96I99 432 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 PPP2R5EQ16537 467 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 NT5C3AQ9H0P0 336 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 LPIN2Q92539 896 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 NDUFB9Q9Y6M9 179 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 ERVV-2B6SEH9 535 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 IRX4P78413 519 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 PALM2Q8IXS6 379 aa17.32■□□□□ 0.36
PCDHA6-203ENST00000529310 ATP1A2P50993 1020 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 VCX3AQ9NNX9 186 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 RABGAP1Q9Y3P9 1069 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 KDM5DQ9BY66 1539 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 hCG_1642624A0A1W2PR95 340 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 NR1I2O75469 434 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 SLC12A2P55011 1212 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 ZNF772Q68DY9 489 aaPredicted RBP17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 BCAS4Q8TDM0 211 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 MORC3Q14149 939 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 REXO1Q8N1G1 1221 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 SUPT20HQ8NEM7 779 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 RIPOR2Q9Y4F9 1068 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 ZNF532Q9HCE3 1301 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 LRMPQ12912 555 aa17.31■□□□□ 0.36
PCDHA6-203ENST00000529310 ARHGAP42A6NI28 874 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 CHL1O00533 1208 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 PDE1CQ14123 709 aaPredicted RBP17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 KRT12Q99456 494 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 RIC8AQ9NPQ8 531 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 USP19O94966 1318 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 DNM2P50570 870 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 LRRC8AQ8IWT6 810 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 CCDC13Q8IYE1 715 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 UIMC1Q96RL1 719 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 HAUS4Q9H6D7 363 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 UGGT1Q9NYU2 1555 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 ABCB4P21439 1286 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 MRFAP1L1Q96HT8 127 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 MED4Q9NPJ6 270 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 GJA3Q9Y6H8 435 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 NOP56O00567 594 aaKnown RBP17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 KRT19P08727 400 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 TCP1P17987 556 aaKnown RBP17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 ZAP70P43403 619 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 GABPAQ06546 454 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 RSAD2Q8WXG1 361 aa17.3■□□□□ 0.36
PCDHA6-203ENST00000529310 SETSIPP0DME0 302 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 PHBP35232 272 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 FAM71BQ8TC56 605 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 GRK7Q8WTQ7 553 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 NSMCE1Q8WV22 266 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 ZNF274Q96GC6 653 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 NPC1L1Q9UHC9 1359 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 VGLL3A8MV65 326 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 IFNB1P01574 187 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 GSDMBQ8TAX9 411 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 PPP4R1Q8TF05 950 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 DDX27Q96GQ7 796 aaKnown RBP17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 TRIM6Q9C030 488 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 GGA1Q9UJY5 639 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 MAST3O60307 1309 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 GCKP35557 465 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 TRIM68Q6AZZ1 485 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 RDH13Q8NBN7 331 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 GINS2Q9Y248 185 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 ADCY8P40145 1251 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 MYOCDQ8IZQ8 938 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 USP28Q96RU2 1077 aa17.29■□□□□ 0.36
PCDHA6-203ENST00000529310 GCC2Q8IWJ2 1684 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms