RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 FOSP01100 380 aaPredicted RBP16.68■□□□□ 0.26
ATM-212ENST00000527805 PTGDRQ13258 359 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 CEP95Q96GE4 821 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.68■□□□□ 0.26
ATM-212ENST00000527805 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
ATM-212ENST00000527805 POLLQ9UGP5 575 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 MON2Q7Z3U7 1717 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 NWD1Q149M9 1564 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
ATM-212ENST00000527805 PRPF3O43395 683 aaKnown RBP16.68■□□□□ 0.26
ATM-212ENST00000527805 TECP42680 631 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 NR5A1Q13285 461 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 CCDC181Q5TID7 509 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 C12orf60Q5U649 245 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 DYMQ7RTS9 669 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 SPAG5Q96R06 1193 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
ATM-212ENST00000527805 DKC1O60832 514 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATM-212ENST00000527805 RAD51AP2Q09MP3 1159 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 GNPTABQ3T906 1256 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 BRDTQ58F21 947 aaPredicted RBP16.67■□□□□ 0.26
ATM-212ENST00000527805 SYDE2Q5VT97 1194 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 MAEAQ7L5Y9 396 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 CNOT7Q9UIV1 285 aaKnown RBP16.67■□□□□ 0.26
ATM-212ENST00000527805 PCDHA4Q9UN74 947 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 OR52Z1P0C646 297 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 WRNIP1Q96S55 665 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 MYL5Q02045 173 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 HERC4Q5GLZ8 1057 aaPredicted RBP16.67■□□□□ 0.26
ATM-212ENST00000527805 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 TPH2Q8IWU9 490 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 MICALL2Q8IY33 904 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
ATM-212ENST00000527805 ARGLU1Q9NWB6 273 aaPredicted RBP16.67■□□□□ 0.26
ATM-212ENST00000527805 PFKFB1P16118 471 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 KIF23Q02241 960 aaPredicted RBP16.66■□□□□ 0.26
ATM-212ENST00000527805 GPS2Q13227 327 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 DDX25Q9UHL0 483 aaKnown RBP16.66■□□□□ 0.26
ATM-212ENST00000527805 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 STK24Q9Y6E0 443 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 RGL2O15211 777 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 SSR1P43307 286 aaKnown RBP16.66■□□□□ 0.26
ATM-212ENST00000527805 ERCC4Q92889 916 aaPredicted RBP16.66■□□□□ 0.26
ATM-212ENST00000527805 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATM-212ENST00000527805 CPVLQ9H3G5 476 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 AZI2Q9H6S1 392 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 TRMT1Q9NXH9 659 aaKnown RBP16.66■□□□□ 0.26
ATM-212ENST00000527805 SERTAD1Q9UHV2 236 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 CCDC169A6NNP5 214 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 IGSF3O75054 1194 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 XRCC6P12956 609 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATM-212ENST00000527805 DDR1Q08345 913 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 BEGAINQ9BUH8 593 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 USP17L5A8MUK1 530 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 TRAF5O00463 557 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 PSMD14O00487 310 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 PHACTR2O75167 634 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 MMP1P03956 469 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 POSTNQ15063 836 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 RSBN1LQ6PCB5 846 aaPredicted RBP16.66■□□□□ 0.26
ATM-212ENST00000527805 SLC10A4Q96EP9 437 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 DNAI2Q9GZS0 605 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
ATM-212ENST00000527805 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 PLA2G4DQ86XP0 818 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 PGBD1Q96JS3 809 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 PRM3Q9NNZ6 103 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 UBXN2AP68543 259 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 NCBP1Q09161 790 aaKnown RBP16.65■□□□□ 0.26
ATM-212ENST00000527805 HHIPL2Q6UWX4 724 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 NALCNQ8IZF0 1738 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 FGFR2P21802 821 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 TSGA10IPQ3SY00 556 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 MTA3Q9BTC8 594 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 ZHX2Q9Y6X8 837 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 ORC4O43929 436 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 MKRN3Q13064 507 aaKnown RBP16.65■□□□□ 0.26
ATM-212ENST00000527805 PTPN14Q15678 1187 aa16.65■□□□□ 0.26
ATM-212ENST00000527805 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
ATM-212ENST00000527805 APOBEC3FQ8IUX4 373 aaKnown RBP16.65■□□□□ 0.26
ATM-212ENST00000527805 CHD2O14647 1828 aaKnown RBP16.64■□□□□ 0.25
ATM-212ENST00000527805 WDR19Q8NEZ3 1342 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 EEF2P13639 858 aaKnown RBP16.64■□□□□ 0.25
ATM-212ENST00000527805 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 MIER3Q7Z3K6 550 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 OSBPL5Q9H0X9 879 aaPredicted RBP16.64■□□□□ 0.25
ATM-212ENST00000527805 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 FLT1P17948 1338 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 AKR1B1P15121 316 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 SMTNP53814 917 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 BLZF1Q9H2G9 400 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 RTEL1Q9NZ71 1219 aa16.64■□□□□ 0.25
ATM-212ENST00000527805 CMA1P23946 247 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms