RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 GATA6Q92908 595 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 VWCEQ96DN2 955 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 SPOCK3Q9BQ16 436 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 PRDM14Q9GZV8 571 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 MKNK2Q9HBH9 465 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 GP6Q9HCN6 339 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 GPATCH2Q9NW75 528 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 AKT3Q9Y243 479 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 DIS3Q9Y2L1 958 aaKnown RBP5.75□□□□□ -1.49
SKP1-212ENST00000523966 SF3B6Q9Y3B4 125 aaKnown RBP5.75□□□□□ -1.49
SKP1-212ENST00000523966 ZNF451Q9Y4E5 1061 aa5.75□□□□□ -1.49
SKP1-212ENST00000523966 A0A087WZG4 1122 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 SSU72P8A0A1W2PR75 194 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 NMIQ13287 307 aaPredicted RBP5.74□□□□□ -1.49
SKP1-212ENST00000523966 CDKAL1Q5VV42 579 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 CWF19L1Q69YN2 538 aaKnown RBP5.74□□□□□ -1.49
SKP1-212ENST00000523966 MRM1Q6IN84 353 aaKnown RBP5.74□□□□□ -1.49
SKP1-212ENST00000523966 C22orf34Q6ZV56 151 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 DTWD2Q8NBA8 298 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 BVESQ8NE79 360 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 ADCY4Q8NFM4 1077 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 ENOX1Q8TC92 643 aaKnown RBP5.74□□□□□ -1.49
SKP1-212ENST00000523966 SGSM3Q96HU1 749 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 HEXIM2Q96MH2 286 aaKnown RBP5.74□□□□□ -1.49
SKP1-212ENST00000523966 SPATA9Q9BWV2 254 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 KLHL25Q9H0H3 589 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 PRR13Q9NZ81 148 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 PIM2Q9P1W9 311 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 ZMYM5Q9UJ78 669 aa5.74□□□□□ -1.49
SKP1-212ENST00000523966 ZNF865P0CJ78 1059 aaPredicted RBP5.73□□□□□ -1.49
SKP1-212ENST00000523966 GRIK1P39086 918 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 HSP90AA2PQ14568 343 aaPredicted RBP5.73□□□□□ -1.49
SKP1-212ENST00000523966 PPP2R5DQ14738 602 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 SLC10A6Q3KNW5 377 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 SDE2Q6IQ49 451 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 SPATC1Q76KD6 591 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 FAM214BQ7L5A3 538 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 SHISA5Q8N114 240 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 THAP3Q8WTV1 239 aaPredicted RBP5.73□□□□□ -1.49
SKP1-212ENST00000523966 BRF1Q92994 677 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 CDC6Q99741 560 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 CHST7Q9NS84 486 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 GFOD1Q9NXC2 390 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 FHOD1Q9Y613 1164 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 MRPL42Q9Y6G3 142 aaKnown RBP5.73□□□□□ -1.49
SKP1-212ENST00000523966 CAPN6Q9Y6Q1 641 aa5.73□□□□□ -1.49
SKP1-212ENST00000523966 TMEM265A0A087WTH1 108 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 MEIS1O00470 390 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 CBFA2T2O43439 604 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 SIGLEC6O43699 453 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 ITGB2P05107 769 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 NOP2P46087 812 aaKnown RBP5.72□□□□□ -1.49
SKP1-212ENST00000523966 ZNF445P59923 1031 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 POU4F1Q01851 419 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 TNK2Q07912 1038 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 RSPO4Q2I0M5 234 aaPredicted RBP5.72□□□□□ -1.49
SKP1-212ENST00000523966 TAF7LQ5H9L4 462 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 ZC3H12BQ5HYM0 836 aaKnown RBP5.72□□□□□ -1.49
SKP1-212ENST00000523966 NKAPLQ5M9Q1 402 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 HOMER1Q86YM7 354 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 FIBCD1Q8N539 461 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 FAM181AQ8N9Y4 354 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 NETO1Q8TDF5 533 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 SYTL5Q8TDW5 730 aaPredicted RBP5.72□□□□□ -1.49
SKP1-212ENST00000523966 SH3TC2Q8TF17 1288 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 APPBP2Q92624 585 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 SYTL4Q96C24 671 aaPredicted RBP5.72□□□□□ -1.49
SKP1-212ENST00000523966 RCC1LQ96I51 464 aaKnown RBP5.72□□□□□ -1.49
SKP1-212ENST00000523966 Q96M66 194 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 SLC26A8Q96RN1 970 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 NOL6Q9H6R4 1146 aaKnown RBP5.72□□□□□ -1.49
SKP1-212ENST00000523966 CNTNAP4Q9C0A0 1308 aa5.72□□□□□ -1.49
SKP1-212ENST00000523966 COL17A1Q9UMD9 1497 aaPredicted RBP5.71□□□□□ -1.49
SKP1-212ENST00000523966 TRAV20A0A0B4J274 112 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 PRR33A8MZF0 331 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 DYRK3O43781 588 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 PRAMEF1O95521 474 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 PROCP04070 461 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 CEACAM5P06731 702 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 OXCT1P55809 520 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 IFI16Q16666 785 aaKnown RBP5.71□□□□□ -1.5
SKP1-212ENST00000523966 C2orf27AQ580R0 203 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 TMC3Q7Z5M5 1100 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 LILRB2Q8N423 598 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 ZNF655Q8N720 491 aaPredicted RBP5.71□□□□□ -1.5
SKP1-212ENST00000523966 ZSWIM2Q8NEG5 633 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 ZDHHC15Q96MV8 337 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 GPR62Q9BZJ7 368 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 SLKQ9H2G2 1235 aaPredicted RBP5.71□□□□□ -1.5
SKP1-212ENST00000523966 SEMA6BQ9H3T3 888 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 ZSWIM5Q9P217 1185 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 SUSD2Q9UGT4 822 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 TBX22Q9Y458 520 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 SNX11Q9Y5W9 270 aa5.71□□□□□ -1.5
SKP1-212ENST00000523966 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 H3BS24 57 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 DIAPH1O60610 1272 aaKnown RBP5.7□□□□□ -1.5
SKP1-212ENST00000523966 CDC45O75419 566 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 KCNH1O95259 989 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 GSNP06396 782 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms