RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 KLF4O43474 513 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 ACRP10323 421 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 RAC2P15153 192 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 SOGA3Q5TF21 947 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 ANKS3Q6ZW76 656 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 PHACTR4Q8IZ21 702 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 RIN3Q8TB24 985 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 UBE2FQ969M7 185 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 SYTL4Q96C24 671 aaPredicted RBP5.93□□□□□ -1.46
PCM1-220ENST00000523896 CCDC74BQ96LY2 380 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 DNAJC2Q99543 621 aaKnown RBP5.93□□□□□ -1.46
PCM1-220ENST00000523896 SEMA3GQ9NS98 782 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 SLC12A7Q9Y666 1083 aa5.93□□□□□ -1.46
PCM1-220ENST00000523896 A0A1W2PQH9 124 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 LRRC10BA6NIK2 292 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 C8AP07357 584 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 MPZL3Q6UWV2 235 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 TMPRSS7Q7RTY8 843 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 TTC6Q86TZ1 520 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 KIRREL1Q96J84 757 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 ALPK1Q96QP1 1244 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 SLC9A7Q96T83 725 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 GPATCH2Q9NW75 528 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 ACTR10Q9NZ32 417 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 CTNND2Q9UQB3 1225 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 ST14Q9Y5Y6 855 aa5.92□□□□□ -1.46
PCM1-220ENST00000523896 CARMIL2Q6F5E8 1435 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 UBOX5O94941 541 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 POLR2BP30876 1174 aaKnown RBP5.91□□□□□ -1.46
PCM1-220ENST00000523896 TNK2Q07912 1038 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 RAB33AQ14088 237 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 TMEM67Q5HYA8 995 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 ZNF648Q5T619 568 aaPredicted RBP5.91□□□□□ -1.46
PCM1-220ENST00000523896 DNAJB8Q8NHS0 232 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 BAHD1Q8TBE0 780 aaPredicted RBP5.91□□□□□ -1.46
PCM1-220ENST00000523896 PPP1R13LQ8WUF5 828 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 HNRNPLLQ8WVV9 542 aaKnown RBP5.91□□□□□ -1.46
PCM1-220ENST00000523896 KIF2CQ99661 725 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 SLAMF8Q9P0V8 285 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 CEP131Q9UPN4 1083 aa5.91□□□□□ -1.46
PCM1-220ENST00000523896 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
PCM1-220ENST00000523896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
PCM1-220ENST00000523896 GDNFP39905 211 aa5.9□□□□□ -1.46
PCM1-220ENST00000523896 SERINC3Q13530 473 aa5.9□□□□□ -1.46
PCM1-220ENST00000523896 ZYXQ15942 572 aaKnown RBP5.9□□□□□ -1.46
PCM1-220ENST00000523896 PPP2R5EQ16537 467 aa5.9□□□□□ -1.46
PCM1-220ENST00000523896 UNC5AQ6ZN44 842 aa5.9□□□□□ -1.46
PCM1-220ENST00000523896 CREG2Q8IUH2 290 aa5.9□□□□□ -1.46
PCM1-220ENST00000523896 GLI1P08151 1106 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 GBP1P32455 592 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 FZD5Q13467 585 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 MLANAQ16655 118 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 FAM84AQ96KN4 292 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 TRIM55Q9BYV6 548 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 LNPKQ9C0E8 428 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.89□□□□□ -1.47
PCM1-220ENST00000523896 PHAXQ9H814 394 aaKnown RBP5.89□□□□□ -1.47
PCM1-220ENST00000523896 CNTNAP4Q9C0A0 1308 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 LTBP3Q9NS15 1303 aa5.89□□□□□ -1.47
PCM1-220ENST00000523896 TPP2P29144 1249 aaPredicted RBP5.88□□□□□ -1.47
PCM1-220ENST00000523896 LTKP29376 864 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 FXNQ16595 210 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 DDR2Q16832 855 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 TMEM192Q8IY95 271 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 PMFBP1Q8TBY8 1022 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 RNF141Q8WVD5 230 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 DHRS1Q96LJ7 313 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 SLC6A18Q96N87 628 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 ASCC2Q9H1I8 757 aaPredicted RBP5.88□□□□□ -1.47
PCM1-220ENST00000523896 OSBPL2Q9H1P3 480 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 SIRPGQ9P1W8 387 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 SUCOQ9UBS9 1254 aaKnown RBP5.88□□□□□ -1.47
PCM1-220ENST00000523896 DUSP13Q9UII6 198 aa5.88□□□□□ -1.47
PCM1-220ENST00000523896 ZNF214Q9UL59 606 aaPredicted RBP5.88□□□□□ -1.47
PCM1-220ENST00000523896 FAM86C2PA6NEL3 165 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 CLEC3AO75596 197 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 PMS1P54277 932 aaKnown RBP5.87□□□□□ -1.47
PCM1-220ENST00000523896 RNF4P78317 190 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 CLEC16AQ2KHT3 1053 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 BBS9Q3SYG4 887 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 LARP1BQ659C4 914 aaKnown RBP5.87□□□□□ -1.47
PCM1-220ENST00000523896 DPH6Q7L8W6 267 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 CELF2-AS1Q8N7Q2 184 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 SMARCC1Q92922 1105 aaPredicted RBP5.87□□□□□ -1.47
PCM1-220ENST00000523896 MKL1Q969V6 931 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 KREMEN1Q96MU8 473 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 PPP1R16BQ96T49 567 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 ASPNQ9BXN1 380 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 TMEM59LQ9UK28 342 aa5.87□□□□□ -1.47
PCM1-220ENST00000523896 U2SURPO15042 1029 aaKnown RBP5.86□□□□□ -1.47
PCM1-220ENST00000523896 HK2P52789 917 aa5.86□□□□□ -1.47
PCM1-220ENST00000523896 PPFIBP1Q86W92 1011 aa5.86□□□□□ -1.47
PCM1-220ENST00000523896 DTWD2Q8NBA8 298 aa5.86□□□□□ -1.47
PCM1-220ENST00000523896 ABHD4Q8TB40 342 aa5.86□□□□□ -1.47
PCM1-220ENST00000523896 VWCEQ96DN2 955 aa5.86□□□□□ -1.47
PCM1-220ENST00000523896 LIN37Q96GY3 246 aaPredicted RBP5.86□□□□□ -1.47
PCM1-220ENST00000523896 MSRB2Q9Y3D2 182 aa5.86□□□□□ -1.47
PCM1-220ENST00000523896 SLC7A5Q01650 507 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 EGR3Q06889 387 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms