RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 VEGFBP49765 207 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 GNAQP50148 359 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 HMGCS2P54868 508 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 KIF23Q02241 960 aaPredicted RBP7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 GRM4Q14833 912 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 CCL15Q16663 113 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 SHROOM1Q2M3G4 852 aaPredicted RBP7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 ASPRV1Q53RT3 343 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 SLFN13Q68D06 897 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 GPAT2Q6NUI2 795 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 Q6ZUG5 572 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 FAM160B2Q86V87 743 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 IFNL1Q8IU54 200 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZNF654Q8IZM8 581 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 DNAJC5GQ8N7S2 189 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 MB21D1Q8N884 522 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 CHURC1Q8WUH1 139 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 BRI3BPQ8WY22 251 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZSCAN31Q96LW9 406 aaPredicted RBP7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZKSCAN3Q9BRR0 538 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 MAF1Q9H063 256 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 RBM28Q9NW13 759 aaKnown RBP7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 SAGE1Q9NXZ1 904 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 HOXC10Q9NYD6 342 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 FEM1BQ9UK73 627 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 ADAMTS5Q9UNA0 930 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 SLC12A7Q9Y666 1083 aa7.44□□□□□ -1.22
IGHV4-55-201ENST00000520889 PALM3A6NDB9 673 aaPredicted RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 ATP2A1O14983 1001 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 PARP1P09874 1014 aaKnown RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 SLC1A4P43007 532 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 GCLCP48506 637 aaPredicted RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 NEK4P51957 841 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 OAZ1P54368 228 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 FGD1P98174 961 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 ATP2B2Q01814 1243 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 MAP2K1Q02750 393 aaPredicted RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZNF543Q08ER8 600 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 TOB2Q14106 344 aaPredicted RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 COG2Q14746 738 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 APOA5Q6Q788 366 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 CHST3Q7LGC8 479 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 CLEC10AQ8IUN9 316 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 TEX2Q8IWB9 1127 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 LRRC47Q8N1G4 583 aaKnown RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 JMYQ8N9B5 988 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 PRPF38AQ8NAV1 312 aaKnown RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 FANCBQ8NB91 859 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 CTCFLQ8NI51 663 aaPredicted RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 BRF1Q92994 677 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 PARK7Q99497 189 aaKnown RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 PTPN18Q99952 460 aa7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 RBM27Q9P2N5 1060 aaKnown RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.43□□□□□ -1.22
IGHV4-55-201ENST00000520889 BTBD19C9JJ37 291 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 PDHXO00330 501 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZBTB43O43298 467 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 DHX16O60231 1041 aaKnown RBP7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 DSG3P32926 999 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 COPB2P35606 906 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 STAT2P52630 851 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 TRAF1Q13077 416 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 KIAA1755Q5JYT7 1200 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 NFXL1Q6ZNB6 911 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 GADL1Q6ZQY3 521 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 PAXIP1Q6ZW49 1069 aaPredicted RBP7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 CCDC84Q86UT8 332 aaPredicted RBP7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 FAM177A1Q8N128 213 aaPredicted RBP7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 SLF1Q9BQI6 1058 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 SPZ1Q9BXG8 430 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 UPF3BQ9BZI7 483 aaKnown RBP7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 RPAP3Q9H6T3 665 aaPredicted RBP7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 RIOX1Q9H6W3 641 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZFYVE28Q9HCC9 887 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 SH2B1Q9NRF2 756 aaPredicted RBP7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 PPP1R9AQ9ULJ8 1098 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 LIMCH1Q9UPQ0 1083 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 ADGRA2Q96PE1 1338 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 MGAMO43451 1857 aa7.42□□□□□ -1.22
IGHV4-55-201ENST00000520889 KLF18A0A0U1RQI7 1052 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 hCG_1984214I3L0E3 225 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 IGF2BP3O00425 579 aaKnown RBP eCLIP7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 TLR2O60603 784 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 PFKFB2O60825 505 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 CPA1P15085 419 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 PDIA3P30101 505 aaKnown RBP7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 AK2P54819 239 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 IRX3P78415 501 aaPredicted RBP7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 COL9A3Q14050 684 aaPredicted RBP7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 FAM83BQ5T0W9 1011 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 TREML2Q5T2D2 321 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 FAM43AQ8N2R8 423 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 ZNF713Q8N859 430 aaPredicted RBP7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 RGS22Q8NE09 1264 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 SNX21Q969T3 373 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 MTMR8Q96EF0 704 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 LRRC2Q9BYS8 371 aa7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 ASCC2Q9H1I8 757 aaPredicted RBP7.41□□□□□ -1.22
IGHV4-55-201ENST00000520889 RANBP17Q9H2T7 1088 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms