RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 SWAP70Q9UH65 585 aa20.29■□□□□ 0.84
TNPO1-211ENST00000518279 ZNFX1Q9P2E3 1918 aaKnown RBP20.28■□□□□ 0.84
TNPO1-211ENST00000518279 SMCHD1A6NHR9 2005 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 CYP2D7A0A087X1C5 515 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 SMARCA5O60264 1052 aaPredicted RBP20.28■□□□□ 0.84
TNPO1-211ENST00000518279 CHGBP05060 677 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 ADCYAP1R1P41586 468 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 ICA1Q05084 483 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 SNX17Q15036 470 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 LRRC41Q15345 812 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 FAM47AQ5JRC9 791 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 SAMD1Q6SPF0 538 aaPredicted RBP20.28■□□□□ 0.84
TNPO1-211ENST00000518279 SH3RF1Q7Z6J0 888 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 ABRAQ8N0Z2 381 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 FERMT2Q96AC1 680 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 BOLA2Q9H3K6 86 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
TNPO1-211ENST00000518279 PRDM5Q9NQX1 630 aaPredicted RBP20.28■□□□□ 0.84
TNPO1-211ENST00000518279 COL11A1P12107 1806 aaPredicted RBP20.27■□□□□ 0.84
TNPO1-211ENST00000518279 MBD4O95243 580 aa20.27■□□□□ 0.84
TNPO1-211ENST00000518279 TMEM132BQ14DG7 1078 aa20.27■□□□□ 0.84
TNPO1-211ENST00000518279 BADQ92934 168 aa20.27■□□□□ 0.84
TNPO1-211ENST00000518279 HAUS7Q99871 368 aa20.27■□□□□ 0.84
TNPO1-211ENST00000518279 COL25A1Q9BXS0 654 aaPredicted RBP20.27■□□□□ 0.84
TNPO1-211ENST00000518279 ARHGEF10LQ9HCE6 1279 aa20.27■□□□□ 0.84
TNPO1-211ENST00000518279 PDLIM7Q9NR12 457 aa20.27■□□□□ 0.84
TNPO1-211ENST00000518279 PAG1Q9NWQ8 432 aa20.27■□□□□ 0.84
TNPO1-211ENST00000518279 SLC5A4Q9NY91 659 aa20.27■□□□□ 0.84
TNPO1-211ENST00000518279 TRIM43BA6NCK2 446 aa20.26■□□□□ 0.83
TNPO1-211ENST00000518279 ADD2P35612 726 aa20.26■□□□□ 0.83
TNPO1-211ENST00000518279 CDK8P49336 464 aa20.26■□□□□ 0.83
TNPO1-211ENST00000518279 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
TNPO1-211ENST00000518279 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.26■□□□□ 0.83
TNPO1-211ENST00000518279 TRIM43Q96BQ3 446 aaPredicted RBP20.26■□□□□ 0.83
TNPO1-211ENST00000518279 FBXO28Q9NVF7 368 aa20.26■□□□□ 0.83
TNPO1-211ENST00000518279 FCER1AP12319 257 aa20.25■□□□□ 0.83
TNPO1-211ENST00000518279 ZNF697Q5TEC3 545 aa20.25■□□□□ 0.83
TNPO1-211ENST00000518279 C12orf60Q5U649 245 aa20.25■□□□□ 0.83
TNPO1-211ENST00000518279 ATP8A2Q9NTI2 1148 aa20.25■□□□□ 0.83
TNPO1-211ENST00000518279 ADAMTS5Q9UNA0 930 aa20.25■□□□□ 0.83
TNPO1-211ENST00000518279 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
TNPO1-211ENST00000518279 USP17L12C9JPN9 530 aa20.24■□□□□ 0.83
TNPO1-211ENST00000518279 USP17L21D6R901 530 aa20.24■□□□□ 0.83
TNPO1-211ENST00000518279 WDR46O15213 610 aaKnown RBP20.24■□□□□ 0.83
TNPO1-211ENST00000518279 PGK2P07205 417 aa20.24■□□□□ 0.83
TNPO1-211ENST00000518279 EEF2P13639 858 aaKnown RBP20.24■□□□□ 0.83
TNPO1-211ENST00000518279 CDX2Q99626 313 aaPredicted RBP20.24■□□□□ 0.83
TNPO1-211ENST00000518279 SH2D4AQ9H788 454 aa20.24■□□□□ 0.83
TNPO1-211ENST00000518279 TAL1P17542 331 aaPredicted RBP20.23■□□□□ 0.83
TNPO1-211ENST00000518279 ITGB8P26012 769 aa20.23■□□□□ 0.83
TNPO1-211ENST00000518279 TLE2Q04725 743 aa20.23■□□□□ 0.83
TNPO1-211ENST00000518279 C1orf53Q5VUE5 145 aa20.23■□□□□ 0.83
TNPO1-211ENST00000518279 C16orf86Q6ZW13 317 aa20.23■□□□□ 0.83
TNPO1-211ENST00000518279 CCDC17Q96LX7 622 aa20.23■□□□□ 0.83
TNPO1-211ENST00000518279 MMP19Q99542 508 aa20.23■□□□□ 0.83
TNPO1-211ENST00000518279 SEMA6BQ9H3T3 888 aa20.23■□□□□ 0.83
TNPO1-211ENST00000518279 SLC25A27O95847 323 aa20.22■□□□□ 0.83
TNPO1-211ENST00000518279 HOXD11P31277 338 aaPredicted RBP20.22■□□□□ 0.83
TNPO1-211ENST00000518279 ZNF792Q3KQV3 632 aa20.22■□□□□ 0.83
TNPO1-211ENST00000518279 XPNPEP3Q9NQH7 507 aa20.22■□□□□ 0.83
TNPO1-211ENST00000518279 PHF24Q9UPV7 400 aa20.22■□□□□ 0.83
TNPO1-211ENST00000518279 PLXNA1Q9UIW2 1896 aa20.22■□□□□ 0.83
TNPO1-211ENST00000518279 VWA5AO00534 786 aa20.21■□□□□ 0.83
TNPO1-211ENST00000518279 PGK1P00558 417 aa20.21■□□□□ 0.83
TNPO1-211ENST00000518279 RIOX2Q8IUF8 465 aa20.21■□□□□ 0.83
TNPO1-211ENST00000518279 REPS2Q8NFH8 660 aa20.21■□□□□ 0.83
TNPO1-211ENST00000518279 LENG1Q96BZ8 264 aaPredicted RBP20.21■□□□□ 0.83
TNPO1-211ENST00000518279 YTHDC1Q96MU7 727 aaKnown RBP20.21■□□□□ 0.83
TNPO1-211ENST00000518279 TINF2Q9BSI4 451 aa20.21■□□□□ 0.83
TNPO1-211ENST00000518279 TTYH1Q9H313 450 aaPredicted RBP20.21■□□□□ 0.83
TNPO1-211ENST00000518279 ECHDC1Q9NTX5 307 aa20.21■□□□□ 0.83
TNPO1-211ENST00000518279 ZNF214Q9UL59 606 aaPredicted RBP20.21■□□□□ 0.83
TNPO1-211ENST00000518279 RARBP10826 455 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 STAT3P40763 770 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 EPHB4P54760 987 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 FAM83BQ5T0W9 1011 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 CTR9Q6PD62 1173 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.2■□□□□ 0.82
TNPO1-211ENST00000518279 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.2■□□□□ 0.82
TNPO1-211ENST00000518279 KANSL2Q9H9L4 492 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 NRBP1Q9UHY1 535 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 PPP1R9AQ9ULJ8 1098 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 SLC4A4Q9Y6R1 1079 aa20.2■□□□□ 0.82
TNPO1-211ENST00000518279 MYH7P12883 1935 aa20.19■□□□□ 0.82
TNPO1-211ENST00000518279 ZNF865P0CJ78 1059 aaPredicted RBP20.19■□□□□ 0.82
TNPO1-211ENST00000518279 SMAD3P84022 425 aaKnown RBP20.19■□□□□ 0.82
TNPO1-211ENST00000518279 KCTD2Q14681 263 aa20.19■□□□□ 0.82
TNPO1-211ENST00000518279 UBE3CQ15386 1083 aa20.19■□□□□ 0.82
TNPO1-211ENST00000518279 PUS7LQ9H0K6 701 aaKnown RBP20.19■□□□□ 0.82
TNPO1-211ENST00000518279 MUC3AQ02505 3323 aa20.19■□□□□ 0.82
TNPO1-211ENST00000518279 TTC28Q96AY4 2481 aa20.19■□□□□ 0.82
TNPO1-211ENST00000518279 A0A1W2PQ45 241 aaPredicted RBP20.18■□□□□ 0.82
TNPO1-211ENST00000518279 A0A1W2PQY0 241 aa20.18■□□□□ 0.82
TNPO1-211ENST00000518279 RAD21O60216 631 aa20.18■□□□□ 0.82
TNPO1-211ENST00000518279 RNF180Q86T96 592 aa20.18■□□□□ 0.82
TNPO1-211ENST00000518279 MYLIPQ8WY64 445 aa20.18■□□□□ 0.82
TNPO1-211ENST00000518279 CRBNQ96SW2 442 aa20.18■□□□□ 0.82
TNPO1-211ENST00000518279 DIS3Q9Y2L1 958 aaKnown RBP20.18■□□□□ 0.82
TNPO1-211ENST00000518279 GREB1LQ9C091 1923 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms