RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 ZSWIM6Q9HCJ5 1215 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 GOPCQ9HD26 462 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 SYNPO2Q9UMS6 1093 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 KCNH4Q9UQ05 1017 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 TMX2Q9Y320 296 aa15.24■□□□□ 0.03
PABPC1-205ENST00000518196 MANSC4A6NHS7 340 aaPredicted RBP15.23■□□□□ 0.03
PABPC1-205ENST00000518196 FAM155AB1AL88 458 aaPredicted RBP15.23■□□□□ 0.03
PABPC1-205ENST00000518196 TOP1P11387 765 aaKnown RBP15.23■□□□□ 0.03
PABPC1-205ENST00000518196 CETPP11597 493 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 RPS6KB1P23443 525 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 NOVP48745 357 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 HTRA3P83110 453 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 NOGQ13253 232 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 SIAH1Q8IUQ4 282 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 ENAHQ8N8S7 591 aaPredicted RBP15.23■□□□□ 0.03
PABPC1-205ENST00000518196 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 ANKS1AQ92625 1134 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 KIAA1683Q9H0B3 1180 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 KAT14Q9H8E8 782 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 TMOD4Q9NZQ9 345 aa15.23■□□□□ 0.03
PABPC1-205ENST00000518196 A0A0G2JLL6 359 aaPredicted RBP15.22■□□□□ 0.03
PABPC1-205ENST00000518196 A0A1W2PRG0 241 aa15.22■□□□□ 0.03
PABPC1-205ENST00000518196 CPA1P15085 419 aa15.22■□□□□ 0.03
PABPC1-205ENST00000518196 MTMR2Q13614 643 aa15.22■□□□□ 0.03
PABPC1-205ENST00000518196 SEC23AQ15436 765 aa15.22■□□□□ 0.03
PABPC1-205ENST00000518196 ZYXQ15942 572 aaKnown RBP15.22■□□□□ 0.03
PABPC1-205ENST00000518196 SH3D19Q5HYK7 790 aa15.22■□□□□ 0.03
PABPC1-205ENST00000518196 FASTKD5Q7L8L6 764 aaKnown RBP15.22■□□□□ 0.03
PABPC1-205ENST00000518196 PRRT2Q7Z6L0 340 aaPredicted RBP15.22■□□□□ 0.03
PABPC1-205ENST00000518196 TMEM47Q9BQJ4 181 aa15.22■□□□□ 0.03
PABPC1-205ENST00000518196 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.22■□□□□ 0.03
PABPC1-205ENST00000518196 ARIH1Q9Y4X5 557 aaPredicted RBP15.22■□□□□ 0.03
PABPC1-205ENST00000518196 PTPRFP10586 1907 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.03
PABPC1-205ENST00000518196 SH2B2O14492 632 aaPredicted RBP15.21■□□□□ 0.03
PABPC1-205ENST00000518196 RAD21O60216 631 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 LIFRP42702 1097 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 HMGCS2P54868 508 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 INHBEP58166 350 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 RCSD1Q6JBY9 416 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 NFXL1Q6ZNB6 911 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 GADL1Q6ZQY3 521 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 Q6ZUG5 572 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 TCEANC2Q96MN5 208 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 LRRC2Q9BYS8 371 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
PABPC1-205ENST00000518196 VCPKMTQ9H867 229 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 PDRG1Q9NUG6 133 aa15.21■□□□□ 0.03
PABPC1-205ENST00000518196 CCL15-CCL14A0A0B4J2E2 113 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 CCDC69A6NI79 296 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 VEGFBP49765 207 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 SREBF2Q12772 1141 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 CCL15Q16663 113 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 LRRC47Q8N1G4 583 aaKnown RBP15.2■□□□□ 0.02
PABPC1-205ENST00000518196 PROCA1Q8NCQ7 364 aaPredicted RBP15.2■□□□□ 0.02
PABPC1-205ENST00000518196 PNMA1Q8ND90 353 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 GMCL1P1Q8NEA9 526 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 IL27Q8NEV9 243 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 LPAR1Q92633 364 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 C12orf42Q96LP6 360 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
PABPC1-205ENST00000518196 TESPA1A2RU30 521 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-205ENST00000518196 F5H6K3 240 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 NEK4P51957 841 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 KIF23Q02241 960 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-205ENST00000518196 KLRC3Q07444 240 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 COL9A3Q14050 684 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-205ENST00000518196 RABEP1Q15276 862 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 SLFN13Q68D06 897 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 OTUD7BQ6GQQ9 843 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 SYNE3Q6ZMZ3 975 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 CATIPQ7Z7H3 387 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 FBXL16Q8N461 479 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 KIF2CQ99661 725 aa15.19■□□□□ 0.02
PABPC1-205ENST00000518196 TULP1O00294 542 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-205ENST00000518196 WDR46O15213 610 aaKnown RBP15.18■□□□□ 0.02
PABPC1-205ENST00000518196 AOC2O75106 756 aa15.18■□□□□ 0.02
PABPC1-205ENST00000518196 MAP2K2P36507 400 aa15.18■□□□□ 0.02
PABPC1-205ENST00000518196 PABPC4Q13310 644 aaKnown RBP eCLIP15.18■□□□□ 0.021e-323■■■■■ 57.3
PABPC1-205ENST00000518196 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
PABPC1-205ENST00000518196 SGMS1Q86VZ5 419 aa15.18■□□□□ 0.02
PABPC1-205ENST00000518196 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-205ENST00000518196 MTMR7Q9Y216 660 aa15.18■□□□□ 0.02
PABPC1-205ENST00000518196 SLC12A7Q9Y666 1083 aa15.18■□□□□ 0.02
PABPC1-205ENST00000518196 NDUFB10O96000 172 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 SLC1A4P43007 532 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 TM4SF4P48230 202 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.17■□□□□ 0.02
PABPC1-205ENST00000518196 ANKRD23Q86SG2 305 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 DCAF4Q8WV16 495 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 BRI3BPQ8WY22 251 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 BRF1Q92994 677 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 GMCL1Q96IK5 515 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 AGXT2Q9BYV1 514 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 SENP2Q9HC62 589 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 ISY1Q9ULR0 285 aaKnown RBP15.17■□□□□ 0.02
PABPC1-205ENST00000518196 AGTPBP1Q9UPW5 1226 aa15.17■□□□□ 0.02
PABPC1-205ENST00000518196 LOC285556D6RIA3 1793 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms