RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 ATG4CQ96DT6 458 aa10.84□□□□□ -0.67
SDHA-217ENST00000514233 PAG1Q9NWQ8 432 aa10.84□□□□□ -0.67
SDHA-217ENST00000514233 ATP11BQ9Y2G3 1177 aa10.84□□□□□ -0.67
SDHA-217ENST00000514233 DIS3Q9Y2L1 958 aaKnown RBP10.84□□□□□ -0.67
SDHA-217ENST00000514233 NCOR1O75376 2440 aa10.84□□□□□ -0.67
SDHA-217ENST00000514233 MYH4Q9Y623 1939 aa10.84□□□□□ -0.67
SDHA-217ENST00000514233 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
SDHA-217ENST00000514233 MBD4O95243 580 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 CHGBP05060 677 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 ATP5JP18859 108 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 COPB2P35606 906 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 ADD2P35612 726 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 CDK8P49336 464 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 PLS1Q14651 629 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 TMEM132BQ14DG7 1078 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 UBE3CQ15386 1083 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 TRIM60Q495X7 471 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 ZNF697Q5TEC3 545 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 C16orf86Q6ZW13 317 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 NCAPG2Q86XI2 1143 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 RIOX2Q8IUF8 465 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.83□□□□□ -0.68
SDHA-217ENST00000514233 AMOTL1Q8IY63 956 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 DYNLL2Q96FJ2 89 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.83□□□□□ -0.681e-8■□□□□ 8.1
SDHA-217ENST00000514233 BOLA2Q9H3K6 86 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 ARMT1Q9H993 441 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 KANSL2Q9H9L4 492 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 PDLIM7Q9NR12 457 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 PHF24Q9UPV7 400 aa10.83□□□□□ -0.68
SDHA-217ENST00000514233 GREB1LQ9C091 1923 aaPredicted RBP10.82□□□□□ -0.68
SDHA-217ENST00000514233 RARBP10826 455 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 ADCYAP1R1P41586 468 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
SDHA-217ENST00000514233 SHHQ15465 462 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 ZNF792Q3KQV3 632 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 FAM47AQ5JRC9 791 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 PRAMEF19Q5SWL8 479 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 CLEC10AQ8IUN9 316 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 HAUS7Q99871 368 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 TINF2Q9BSI4 451 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 TACC3Q9Y6A5 838 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 PLXNA1Q9UIW2 1896 aa10.82□□□□□ -0.68
SDHA-217ENST00000514233 SMCHD1A6NHR9 2005 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 TRIM43BA6NCK2 446 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 USP17L21D6R901 530 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 VWA5AO00534 786 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 PRKAB2O43741 272 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 EEF2P13639 858 aaKnown RBP10.81□□□□□ -0.68
SDHA-217ENST00000514233 STAT3P40763 770 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 TLE2Q04725 743 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 C9orf50Q5SZB4 431 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 ANO1Q5XXA6 986 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 RNF180Q86T96 592 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 MSL3Q8N5Y2 521 aaKnown RBP10.81□□□□□ -0.68
SDHA-217ENST00000514233 REPS2Q8NFH8 660 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 BADQ92934 168 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 TRIM43Q96BQ3 446 aaPredicted RBP10.81□□□□□ -0.68
SDHA-217ENST00000514233 DDRGK1Q96HY6 314 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 MMP19Q99542 508 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 COL25A1Q9BXS0 654 aaPredicted RBP10.81□□□□□ -0.68
SDHA-217ENST00000514233 SEMA6BQ9H3T3 888 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 GOPCQ9HD26 462 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 XPNPEP3Q9NQH7 507 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 ZNF214Q9UL59 606 aaPredicted RBP10.81□□□□□ -0.68
SDHA-217ENST00000514233 PPP1R9AQ9ULJ8 1098 aa10.81□□□□□ -0.68
SDHA-217ENST00000514233 ZNFX1Q9P2E3 1918 aaKnown RBP10.8□□□□□ -0.68
SDHA-217ENST00000514233 TMEM265A0A087WTH1 108 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 CYP2D7A0A087X1C5 515 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 SMIM22K7EJ46 135 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 KIAA0355O15063 1070 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
SDHA-217ENST00000514233 KCTD2Q14681 263 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 TSHZ3Q63HK5 1081 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 ZSCAN25Q6NSZ9 544 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 CTR9Q6PD62 1173 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 SH3RF1Q7Z6J0 888 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 FERMT2Q96AC1 680 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 TOX2Q96NM4 488 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 CDX2Q99626 313 aaPredicted RBP10.8□□□□□ -0.68
SDHA-217ENST00000514233 TSEN34Q9BSV6 310 aaKnown RBP10.8□□□□□ -0.68
SDHA-217ENST00000514233 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.8□□□□□ -0.68
SDHA-217ENST00000514233 LRRCC1Q9C099 1032 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 CHMP4BQ9H444 224 aaKnown RBP10.8□□□□□ -0.68
SDHA-217ENST00000514233 PRDM5Q9NQX1 630 aaPredicted RBP10.8□□□□□ -0.68
SDHA-217ENST00000514233 FBXO28Q9NVF7 368 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 SYNGAP1Q96PV0 1343 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 CHD7Q9P2D1 2997 aa10.8□□□□□ -0.68
SDHA-217ENST00000514233 ADAMTS4O75173 837 aa10.79□□□□□ -0.68
SDHA-217ENST00000514233 PGK2P07205 417 aa10.79□□□□□ -0.68
SDHA-217ENST00000514233 CLTBP09497 229 aa10.79□□□□□ -0.68
SDHA-217ENST00000514233 AKR1A1P14550 325 aa10.79□□□□□ -0.68
SDHA-217ENST00000514233 SBK1Q52WX2 424 aa10.79□□□□□ -0.68
SDHA-217ENST00000514233 MAMDC4Q6UXC1 1216 aa10.79□□□□□ -0.68
SDHA-217ENST00000514233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
SDHA-217ENST00000514233 ANKRD33Q7Z3H0 272 aa10.79□□□□□ -0.68
SDHA-217ENST00000514233 FAM161BQ96MY7 647 aa10.79□□□□□ -0.68
SDHA-217ENST00000514233 TEX13BQ9BXU2 312 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms