RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 MFSD14AQ96MC6 490 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 HEXIM2Q96MH2 286 aaKnown RBP6.36□□□□□ -1.39
NIPBL-207ENST00000513819 CWC22Q9HCG8 908 aaKnown RBP6.36□□□□□ -1.39
NIPBL-207ENST00000513819 WHRNQ9P202 907 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 PCDHB12Q9Y5F1 795 aa6.36□□□□□ -1.39
NIPBL-207ENST00000513819 PRR33A8MZF0 331 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 PPM1BO75688 479 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 ITGAVP06756 1048 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 ITGA4P13612 1032 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 ZNF445P59923 1031 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 RASSF7Q02833 373 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 NOL9Q5SY16 702 aaKnown RBP6.35□□□□□ -1.39
NIPBL-207ENST00000513819 PRR23CQ6ZRP0 262 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 ZNF765Q7L2R6 523 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 TMC3Q7Z5M5 1100 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 ZNF227Q86WZ6 799 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 HOMER1Q86YM7 354 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 ZBTB38Q8NAP3 1195 aaPredicted RBP6.35□□□□□ -1.39
NIPBL-207ENST00000513819 SGSM3Q96HU1 749 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 TPSG1Q9NRR2 321 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 GFOD1Q9NXC2 390 aa6.35□□□□□ -1.39
NIPBL-207ENST00000513819 TBX1O43435 398 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 CLSTN1O94985 981 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 ITGB2P05107 769 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 GSK3AP49840 483 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 PPP2R2AP63151 447 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 TKFCQ3LXA3 575 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 PLEKHG4Q58EX7 1191 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 YOD1Q5VVQ6 348 aaPredicted RBP6.34□□□□□ -1.39
NIPBL-207ENST00000513819 FOXB2Q5VYV0 432 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 DTWD2Q8NBA8 298 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 BVESQ8NE79 360 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 ZSWIM2Q8NEG5 633 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 ARHGEF4Q9NR80 690 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 GTF2IRD1Q9UHL9 959 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 MINPP1Q9UNW1 487 aa6.34□□□□□ -1.39
NIPBL-207ENST00000513819 NOP56O00567 594 aaKnown RBP6.33□□□□□ -1.4
NIPBL-207ENST00000513819 F13BP05160 661 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 L1CAMP32004 1257 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 GRIA2P42262 883 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 PPP2R5DQ14738 602 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 CYP27C1Q4G0S4 372 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 C16orf86Q6ZW13 317 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 EXOC2Q96KP1 924 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 AARSD1Q9BTE6 412 aaKnown RBP6.33□□□□□ -1.4
NIPBL-207ENST00000513819 NOL6Q9H6R4 1146 aaKnown RBP6.33□□□□□ -1.4
NIPBL-207ENST00000513819 CGGBP1Q9UFW8 167 aaPredicted RBP6.33□□□□□ -1.4
NIPBL-207ENST00000513819 AKT3Q9Y243 479 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 U3KQE9 123 aa6.33□□□□□ -1.4
NIPBL-207ENST00000513819 TRAV20A0A0B4J274 112 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 SHISA3A0PJX4 238 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 MEIS1O00470 390 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 PPP1R12AO14974 1030 aaPredicted RBP6.32□□□□□ -1.4
NIPBL-207ENST00000513819 ASMTLO95671 621 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 KIR3DL1P43629 444 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 TNK2Q07912 1038 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 KCNMA1Q12791 1236 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 HSP90AA2PQ14568 343 aaPredicted RBP6.32□□□□□ -1.4
NIPBL-207ENST00000513819 PLA2G4EQ3MJ16 856 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 TMEM67Q5HYA8 995 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 FAM209AQ5JX71 171 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 RNF43Q68DV7 783 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 GPAT2Q6NUI2 795 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 ARHGEF39Q8N4T4 335 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 FIBCD1Q8N539 461 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 BTN2A2Q8WVV5 523 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 COX4I2Q96KJ9 171 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 MRGPRX3Q96LB0 322 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 CDC6Q99741 560 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 DSCC1Q9BVC3 393 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 KCNH3Q9ULD8 1083 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 EMC9Q9Y3B6 208 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 FHOD1Q9Y613 1164 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 CAPN6Q9Y6Q1 641 aa6.32□□□□□ -1.4
NIPBL-207ENST00000513819 A0A087WZG4 1122 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 GNAT3A8MTJ3 354 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
NIPBL-207ENST00000513819 KCNH1O95259 989 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 PRAMEF1O95521 474 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 ZNF865P0CJ78 1059 aaPredicted RBP6.31□□□□□ -1.4
NIPBL-207ENST00000513819 NFIAQ12857 509 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 NMIQ13287 307 aaPredicted RBP6.31□□□□□ -1.4
NIPBL-207ENST00000513819 DOC2BQ14184 412 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 LONRF2Q1L5Z9 754 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 DUSP27Q5VZP5 1158 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 KIAA0907Q7Z7F0 614 aaPredicted RBP6.31□□□□□ -1.4
NIPBL-207ENST00000513819 TRIM59Q8IWR1 403 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 MFSD4AQ8N468 514 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 FAM181AQ8N9Y4 354 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 SYTL5Q8TDW5 730 aaPredicted RBP6.31□□□□□ -1.4
NIPBL-207ENST00000513819 RCC1LQ96I51 464 aaKnown RBP6.31□□□□□ -1.4
NIPBL-207ENST00000513819 ZDHHC15Q96MV8 337 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 SLC26A8Q96RN1 970 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 CHST7Q9NS84 486 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 CD2APQ9Y5K6 639 aa6.31□□□□□ -1.4
NIPBL-207ENST00000513819 WDR64B1ANS9 1081 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 H0Y8X5 98 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 PRODHO43272 600 aa6.3□□□□□ -1.4
NIPBL-207ENST00000513819 SIGLEC6O43699 453 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms