RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 CEP131Q9UPN4 1083 aa6.37□□□□□ -1.39
UBE2D3-230ENST00000510599 TCOF1Q13428 1488 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 MYOM3Q5VTT5 1437 aa6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 BUD31P41223 144 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 RPL6Q02878 288 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 TSNAXIP1Q2TAA8 658 aa6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 TSPYL5Q86VY4 417 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 CYB5D2Q8WUJ1 264 aa6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 ACSF2Q96CM8 615 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 IRF2BPLQ9H1B7 796 aa6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 SP110Q9HB58 689 aa6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 SHROOM2Q13796 1616 aa6.36□□□□□ -1.39
UBE2D3-230ENST00000510599 PEX10O60683 326 aa6.35□□□□□ -1.39
UBE2D3-230ENST00000510599 NR0B2Q15466 257 aa6.35□□□□□ -1.39
UBE2D3-230ENST00000510599 MAP3K11Q16584 847 aa6.35□□□□□ -1.39
UBE2D3-230ENST00000510599 ZNF605Q86T29 641 aa6.35□□□□□ -1.39
UBE2D3-230ENST00000510599 INTS4Q96HW7 963 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-230ENST00000510599 MCOLN1Q9GZU1 580 aa6.35□□□□□ -1.39
UBE2D3-230ENST00000510599 C19orf44Q9H6X5 657 aa6.35□□□□□ -1.39
UBE2D3-230ENST00000510599 MIA2Q96PC5 1412 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 RAB3GAP2Q9H2M9 1393 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 ADGBQ8N7X0 1667 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 RBAK-RBAKDNI3L0D1 243 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 PRPF40AO75400 957 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 RLBP1P12271 317 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 DLG4P78352 724 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 CHRNEQ04844 493 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 SPPL2CQ8IUH8 684 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 PCDHA11Q9Y5I1 949 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 IVNS1ABPQ9Y6Y0 642 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 ABCA8O94911 1581 aa6.34□□□□□ -1.39
UBE2D3-230ENST00000510599 NUP153P49790 1475 aaKnown RBP6.34□□□□□ -1.4
UBE2D3-230ENST00000510599 HOXA5P20719 270 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 YARSP54577 528 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 DUSP4Q13115 394 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 SNX17Q15036 470 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 TMEM132EQ6IEE7 984 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 ANKS4BQ8N8V4 417 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 FAM13CQ8NE31 585 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 BAHD1Q8TBE0 780 aaPredicted RBP6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 PPP1R13LQ8WUF5 828 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 RNF141Q8WVD5 230 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 YBX2Q9Y2T7 364 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 AK5Q9Y6K8 562 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 MAPKBP1O60336 1514 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 CDK13Q14004 1512 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 CDC42BPAQ5VT25 1732 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 AKNAQ7Z591 1439 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 CROCC2H7BZ55 1655 aa6.33□□□□□ -1.4
UBE2D3-230ENST00000510599 DNMT1P26358 1616 aaKnown RBP6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 PLCG1P19174 1290 aa6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 TFE3P19532 575 aaPredicted RBP6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 PDE6BP35913 854 aa6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 FAM50AQ14320 339 aaKnown RBP6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 TIGD5Q53EQ6 642 aa6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 PARD6AQ9NPB6 346 aa6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 GPR160Q9UJ42 338 aa6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 CNOT6Q9ULM6 557 aaKnown RBP6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 HFM1A2PYH4 1435 aa6.32□□□□□ -1.4
UBE2D3-230ENST00000510599 TEX51A0A1B0GUA7 166 aa6.31□□□□□ -1.4
UBE2D3-230ENST00000510599 MYOCOSA0A1B0GUC4 107 aa6.31□□□□□ -1.4
UBE2D3-230ENST00000510599 RFXAPO00287 272 aa6.31□□□□□ -1.4
UBE2D3-230ENST00000510599 TCERG1LQ5VWI1 586 aa6.31□□□□□ -1.4
UBE2D3-230ENST00000510599 JARID2Q92833 1246 aaPredicted RBP6.31□□□□□ -1.4
UBE2D3-230ENST00000510599 ZCCHC4Q9H5U6 513 aa6.31□□□□□ -1.4
UBE2D3-230ENST00000510599 ZNF552Q9H707 407 aaPredicted RBP6.31□□□□□ -1.4
UBE2D3-230ENST00000510599 BPNT1O95861 308 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 BMP7P18075 431 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 ITGAEP38570 1179 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 TNNI2P48788 182 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 KCNA1Q09470 495 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 ZNF385BQ569K4 471 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 RELTQ969Z4 430 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 C20orf173Q96LM9 149 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 TIMELESSQ9UNS1 1208 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 CDK11AQ9UQ88 783 aaPredicted RBP6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
UBE2D3-230ENST00000510599 TROQ12816 1431 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-230ENST00000510599 TMEM201Q5SNT2 666 aa6.29□□□□□ -1.4
UBE2D3-230ENST00000510599 CCDC84Q86UT8 332 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-230ENST00000510599 TMEM151BQ8IW70 566 aa6.29□□□□□ -1.4
UBE2D3-230ENST00000510599 SLFN12Q8IYM2 578 aa6.29□□□□□ -1.4
UBE2D3-230ENST00000510599 NOC4LQ9BVI4 516 aaKnown RBP6.29□□□□□ -1.4
UBE2D3-230ENST00000510599 UACAQ9BZF9 1416 aa6.29□□□□□ -1.4
UBE2D3-230ENST00000510599 TLR6Q9Y2C9 796 aa6.29□□□□□ -1.4
UBE2D3-230ENST00000510599 KIF14Q15058 1648 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 NAIPQ13075 1403 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 PTPRKQ15262 1439 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 RBM47A0AV96 593 aaKnown RBP6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 UPK3BL1B0FP48 263 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 UPK3BL2E5RIL1 263 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 TEKQ02763 1124 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 CLEC16AQ2KHT3 1053 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 MEI1Q5TIA1 1274 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 KREMEN1Q96MU8 473 aa6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 DUSP9Q99956 384 aaKnown RBP6.28□□□□□ -1.4
UBE2D3-230ENST00000510599 KCTD3Q9Y597 815 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms