RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 RAD50Q92878 1312 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 ZNF213O14771 459 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 NOVP48745 357 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 TMEM132BQ14DG7 1078 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 SLC9C1Q4G0N8 1177 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 MFSD6Q6ZSS7 791 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 STOX1Q6ZVD7 989 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 GPR142Q7Z601 462 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 REPS2Q8NFH8 660 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 RAET1EQ8TD07 263 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 MOV10L1Q9BXT6 1211 aaKnown RBP16.06■□□□□ 0.16
SNF8-206ENST00000509989 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 ADAMTS5Q9UNA0 930 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 STX8Q9UNK0 236 aa16.06■□□□□ 0.16
SNF8-206ENST00000509989 TNRC18O15417 2968 aaPredicted RBP16.05■□□□□ 0.16
SNF8-206ENST00000509989 KDM4AO75164 1064 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 GNRH1P01148 92 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
SNF8-206ENST00000509989 CYP21A2P08686 494 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 TAL1P17542 331 aaPredicted RBP16.05■□□□□ 0.16
SNF8-206ENST00000509989 CYP2B6P20813 491 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 MCCP23508 829 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 SNAP25P60880 206 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 CCL14Q16627 93 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 BMP2KLQ5H9B9 411 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 TMEM47Q9BQJ4 181 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 LSG1Q9H089 658 aaKnown RBP16.05■□□□□ 0.16
SNF8-206ENST00000509989 PPP1R9AQ9ULJ8 1098 aa16.05■□□□□ 0.16
SNF8-206ENST00000509989 ADCY3O60266 1144 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 GRK4P32298 578 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 ARHGEF6Q15052 776 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 MORN1Q5T089 497 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 TTBK2Q6IQ55 1244 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 USP6NLQ92738 828 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 COA7Q96BR5 231 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 SPATC1LQ9H0A9 340 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 HOXC10Q9NYD6 342 aa16.04■□□□□ 0.16
SNF8-206ENST00000509989 VWA5AO00534 786 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 EN2P19622 333 aaPredicted RBP16.03■□□□□ 0.16
SNF8-206ENST00000509989 HOXD10P28358 340 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 PRMT2P55345 433 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 PLS1Q14651 629 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 WDR78Q5VTH9 848 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 PLEKHH3Q7Z736 793 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 TRIB2Q92519 343 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 MAP4K1Q92918 833 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 SENP2Q9HC62 589 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 FLRT1Q9NZU1 646 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 ZSWIM5Q9P217 1185 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 ZNF214Q9UL59 606 aaPredicted RBP16.03■□□□□ 0.16
SNF8-206ENST00000509989 RIPK3Q9Y572 518 aa16.03■□□□□ 0.16
SNF8-206ENST00000509989 RBM8AQ9Y5S9 174 aaKnown RBP16.03■□□□□ 0.16
SNF8-206ENST00000509989 TMEM232C9JQI7 657 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 BMP3P12645 472 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 ERCC3P19447 782 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 IRF5Q13568 498 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 IMMTQ16891 758 aaKnown RBP16.02■□□□□ 0.16
SNF8-206ENST00000509989 NPLOC4Q8TAT6 608 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 GTF3C2Q8WUA4 911 aaPredicted RBP16.02■□□□□ 0.16
SNF8-206ENST00000509989 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 KIFC2Q96AC6 838 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 SLF1Q9BQI6 1058 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 UNC93B1Q9H1C4 597 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 TCP11L1Q9NUJ3 509 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.16
SNF8-206ENST00000509989 MCM3APO60318 1980 aa16.02■□□□□ 0.15
SNF8-206ENST00000509989 LCTP09848 1927 aa16.02■□□□□ 0.15
SNF8-206ENST00000509989 ZNF236Q9UL36 1845 aa16.01■□□□□ 0.15
SNF8-206ENST00000509989 FRMPD2Q68DX3 1309 aaPredicted RBP16.01■□□□□ 0.15
SNF8-206ENST00000509989 INHAP05111 366 aa16.01■□□□□ 0.15
SNF8-206ENST00000509989 PTPREP23469 700 aa16.01■□□□□ 0.15
SNF8-206ENST00000509989 MAPK4P31152 587 aa16.01■□□□□ 0.15
SNF8-206ENST00000509989 SLC16A2P36021 539 aa16.01■□□□□ 0.15
SNF8-206ENST00000509989 CHST3Q7LGC8 479 aa16.01■□□□□ 0.15
SNF8-206ENST00000509989 CPVLQ9H3G5 476 aa16.01■□□□□ 0.15
SNF8-206ENST00000509989 FRMPD3Q5JV73 1810 aa16.01■□□□□ 0.15
SNF8-206ENST00000509989 MYH6P13533 1939 aa16■□□□□ 0.15
SNF8-206ENST00000509989 COBLO75128 1261 aa16■□□□□ 0.15
SNF8-206ENST00000509989 CCL5P13501 91 aa16■□□□□ 0.15
SNF8-206ENST00000509989 SLC4A3P48751 1232 aa16■□□□□ 0.15
SNF8-206ENST00000509989 RGS19P49795 217 aa16■□□□□ 0.15
SNF8-206ENST00000509989 NCAPG2Q86XI2 1143 aa16■□□□□ 0.15
SNF8-206ENST00000509989 CPXCR1Q8N123 301 aa16■□□□□ 0.15
SNF8-206ENST00000509989 ESR2Q92731 530 aa16■□□□□ 0.15
SNF8-206ENST00000509989 RNF41Q9H4P4 317 aaPredicted RBP16■□□□□ 0.15
SNF8-206ENST00000509989 RAVER2Q9HCJ3 691 aaKnown RBP16■□□□□ 0.15
SNF8-206ENST00000509989 GPCPD1Q9NPB8 672 aa16■□□□□ 0.15
SNF8-206ENST00000509989 BIN2Q9UBW5 565 aaPredicted RBP16■□□□□ 0.15
SNF8-206ENST00000509989 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
SNF8-206ENST00000509989 ISY1Q9ULR0 285 aaKnown RBP16■□□□□ 0.15
SNF8-206ENST00000509989 ZNF536O15090 1300 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 BAZ2BQ9UIF8 2168 aaKnown RBP15.99■□□□□ 0.15
SNF8-206ENST00000509989 E7EWF7 191 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 GOLGA8HP0CJ92 632 aa15.99■□□□□ 0.15
SNF8-206ENST00000509989 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms