RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 VAMP1P23763 118 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 ERVK-24P63145 666 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 FANCCQ00597 558 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 LMNB2Q03252 620 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 PWP1Q13610 501 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 ZNF394Q53GI3 561 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 SNAP47Q5SQN1 464 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 HDXQ7Z353 690 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 SMYD4Q8IYR2 804 aaPredicted RBP5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 SHISA5Q8N114 240 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 GOLM1Q8NBJ4 401 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 RNF214Q8ND24 703 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 RNF34Q969K3 372 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 ISL2Q96A47 359 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 RHOVQ96L33 236 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 GSX1Q9H4S2 264 aaPredicted RBP5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 PCDHGB7Q9Y5F8 929 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 SETD5Q9C0A6 1442 aa5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 XRN1Q8IZH2 1706 aaKnown RBP5.11□□□□□ -1.59
UBE2D3-226ENST00000508635 CCDC144AA2RUR9 1427 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 SCAMP3O14828 347 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 TLR3O15455 904 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 KIF1BO60333 1816 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 ADAMTS4O75173 837 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 F13A1P00488 732 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 GRIK1P39086 918 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 MAP7Q14244 749 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 RNF43Q68DV7 783 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 SCARA3Q6AZY7 606 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 SPATA31E1Q6ZUB1 1445 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 UBE3DQ7Z6J8 389 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 FBXO27Q8NI29 283 aa5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 EZH1Q92800 747 aaPredicted RBP5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 RGS17Q9UGC6 210 aaPredicted RBP5.1□□□□□ -1.59
UBE2D3-226ENST00000508635 DCCP43146 1447 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 MST1RQ04912 1400 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 RAB3GAP2Q9H2M9 1393 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 ROBO2Q9HCK4 1378 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 JCADQ9P266 1359 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 ADGRF5Q8IZF2 1346 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 IGLV1-40P01703 118 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 ADMP35318 185 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 EIF4A3P38919 411 aaKnown RBP5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 ETF1P62495 437 aaKnown RBP5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 RING1Q06587 406 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 NFIAQ12857 509 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 CDK5R2Q13319 367 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 RGL3Q3MIN7 710 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 ZBTB37Q5TC79 503 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 FBXL19Q6PCT2 694 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 BRINP3Q76B58 766 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 CDC37L1Q7L3B6 337 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 USP48Q86UV5 1035 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 ZNF296Q8WUU4 475 aaPredicted RBP5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 TBC1D32Q96NH3 1257 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 METTL5Q9NRN9 209 aaKnown RBP5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 PRKAG2Q9UGJ0 569 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 ADAMTS1Q9UHI8 967 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 ADGRE2Q9UHX3 823 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 SNCAIPQ9Y6H5 919 aa5.09□□□□□ -1.59
UBE2D3-226ENST00000508635 PPLO60437 1756 aa5.09□□□□□ -1.6
UBE2D3-226ENST00000508635 COL16A1Q07092 1604 aaPredicted RBP5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 PTCH1Q13635 1447 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 PRAG1Q86YV5 1406 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 ADGRL3Q9HAR2 1447 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 FAM221AA4D161 298 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 WDR64B1ANS9 1081 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 GFRA2O00451 464 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 FANCGO15287 622 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 BPNT1O95861 308 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 WNT11O96014 354 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 GARTP22102 1010 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 GRK4P32298 578 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 NTF4P34130 210 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 HDLBPQ00341 1268 aaKnown RBP5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 RPL6Q02878 288 aaKnown RBP5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 CYFIP1Q7L576 1253 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 SHKBP1Q8TBC3 707 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 GATAD2BQ8WXI9 593 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 ASIC4Q96FT7 647 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 FBRSQ9HAH7 460 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 C1GALT1Q9NS00 363 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 PCOLCE2Q9UKZ9 415 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 CORINQ9Y5Q5 1042 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 SETD1AO15047 1707 aaKnown RBP5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 PHLPP1O60346 1717 aa5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 AHDC1Q5TGY3 1603 aaPredicted RBP5.08□□□□□ -1.6
UBE2D3-226ENST00000508635 ASXL1Q8IXJ9 1541 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 ANKRD30BQ9BXX2 1392 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 SPATA31A6Q5VVP1 1343 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 FAM170BA6NMN3 283 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 GRIN3BO60391 1043 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 CILPO75339 1184 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 F13BP05160 661 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 SPINK2P20155 84 aa5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 RACK1P63244 317 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 DIEXFQ68CQ4 756 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-226ENST00000508635 SEZ6L2Q6UXD5 910 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms