RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 C12orf60Q5U649 245 aa27.74■■■□□ 2.03
CALCOCO2-209ENST00000507076 FERMT2Q96AC1 680 aa27.74■■■□□ 2.03
CALCOCO2-209ENST00000507076 USP17L12C9JPN9 530 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 USP17L21D6R901 530 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 ADCYAP1R1P41586 468 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 LRRC41Q15345 812 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 FAM109BQ6ICB4 259 aaPredicted RBP27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 MIER1Q8N108 512 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 CCDC17Q96LX7 622 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 FBXO28Q9NVF7 368 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 COG6Q9Y2V7 657 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 MYH4Q9Y623 1939 aa27.73■■■□□ 2.03
CALCOCO2-209ENST00000507076 EEF2P13639 858 aaKnown RBP27.72■■■□□ 2.03
CALCOCO2-209ENST00000507076 SHHQ15465 462 aa27.72■■■□□ 2.03
CALCOCO2-209ENST00000507076 C16orf86Q6ZW13 317 aa27.72■■■□□ 2.03
CALCOCO2-209ENST00000507076 AMOTL1Q8IY63 956 aa27.72■■■□□ 2.03
CALCOCO2-209ENST00000507076 RAB11FIP3O75154 756 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 PGK2P07205 417 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 ATP5JP18859 108 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 SNX17Q15036 470 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 C9orf50Q5SZB4 431 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 ZNF697Q5TEC3 545 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 BADQ92934 168 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 MMP19Q99542 508 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 HAUS7Q99871 368 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 PDLIM7Q9NR12 457 aa27.71■■■□□ 2.03
CALCOCO2-209ENST00000507076 ZBED9Q6R2W3 1325 aa27.7■■■□□ 2.03
CALCOCO2-209ENST00000507076 UNC80Q8N2C7 3258 aa27.7■■■□□ 2.03
CALCOCO2-209ENST00000507076 RAD21O60216 631 aa27.7■■■□□ 2.02
CALCOCO2-209ENST00000507076 SLC25A27O95847 323 aa27.7■■■□□ 2.02
CALCOCO2-209ENST00000507076 MS4A1P11836 297 aa27.7■■■□□ 2.02
CALCOCO2-209ENST00000507076 SH3RF1Q7Z6J0 888 aa27.7■■■□□ 2.02
CALCOCO2-209ENST00000507076 ZBTB40Q9NUA8 1239 aa27.7■■■□□ 2.02
CALCOCO2-209ENST00000507076 DDX19BQ9UMR2 479 aa27.7■■■□□ 2.02
CALCOCO2-209ENST00000507076 SLC4A4Q9Y6R1 1079 aa27.7■■■□□ 2.02
CALCOCO2-209ENST00000507076 DDRGK1Q96HY6 314 aa27.69■■■□□ 2.02
CALCOCO2-209ENST00000507076 XPNPEP3Q9NQH7 507 aa27.69■■■□□ 2.02
CALCOCO2-209ENST00000507076 ADAMTS5Q9UNA0 930 aa27.69■■■□□ 2.02
CALCOCO2-209ENST00000507076 MCM3APO60318 1980 aa27.69■■■□□ 2.02
CALCOCO2-209ENST00000507076 RIOX2Q8IUF8 465 aa27.68■■■□□ 2.02
CALCOCO2-209ENST00000507076 KANSL2Q9H9L4 492 aa27.68■■■□□ 2.02
CALCOCO2-209ENST00000507076 TRIM43BA6NCK2 446 aa27.67■■■□□ 2.02
CALCOCO2-209ENST00000507076 RARBP10826 455 aa27.67■■■□□ 2.02
CALCOCO2-209ENST00000507076 UBE3CQ15386 1083 aa27.67■■■□□ 2.02
CALCOCO2-209ENST00000507076 FAM83BQ5T0W9 1011 aa27.67■■■□□ 2.02
CALCOCO2-209ENST00000507076 CTR9Q6PD62 1173 aa27.67■■■□□ 2.02
CALCOCO2-209ENST00000507076 TRIM43Q96BQ3 446 aaPredicted RBP27.67■■■□□ 2.02
CALCOCO2-209ENST00000507076 GOPCQ9HD26 462 aa27.67■■■□□ 2.02
CALCOCO2-209ENST00000507076 PPP1R9AQ9ULJ8 1098 aa27.67■■■□□ 2.02
CALCOCO2-209ENST00000507076 VWA5AO00534 786 aa27.66■■■□□ 2.02
CALCOCO2-209ENST00000507076 PGK1P00558 417 aa27.66■■■□□ 2.02
CALCOCO2-209ENST00000507076 TAL1P17542 331 aaPredicted RBP27.66■■■□□ 2.02
CALCOCO2-209ENST00000507076 KCTD2Q14681 263 aa27.66■■■□□ 2.02
CALCOCO2-209ENST00000507076 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.66■■■□□ 2.02
CALCOCO2-209ENST00000507076 TINF2Q9BSI4 451 aa27.66■■■□□ 2.02
CALCOCO2-209ENST00000507076 PUS7LQ9H0K6 701 aaKnown RBP27.66■■■□□ 2.02
CALCOCO2-209ENST00000507076 PHF24Q9UPV7 400 aa27.66■■■□□ 2.02
CALCOCO2-209ENST00000507076 STAT3P40763 770 aa27.65■■■□□ 2.02
CALCOCO2-209ENST00000507076 TLE2Q04725 743 aa27.65■■■□□ 2.02
CALCOCO2-209ENST00000507076 ZNF792Q3KQV3 632 aa27.65■■■□□ 2.02
CALCOCO2-209ENST00000507076 LENG1Q96BZ8 264 aaPredicted RBP27.65■■■□□ 2.02
CALCOCO2-209ENST00000507076 ZNF214Q9UL59 606 aaPredicted RBP27.65■■■□□ 2.02
CALCOCO2-209ENST00000507076 C1orf53Q5VUE5 145 aa27.64■■■□□ 2.02
CALCOCO2-209ENST00000507076 STK11IPQ8N1F8 1099 aa27.64■■■□□ 2.02
CALCOCO2-209ENST00000507076 REPS2Q8NFH8 660 aa27.64■■■□□ 2.02
CALCOCO2-209ENST00000507076 NUP88Q99567 741 aaPredicted RBP27.64■■■□□ 2.02
CALCOCO2-209ENST00000507076 COL25A1Q9BXS0 654 aaPredicted RBP27.64■■■□□ 2.02
CALCOCO2-209ENST00000507076 NRBP1Q9UHY1 535 aa27.64■■■□□ 2.02
CALCOCO2-209ENST00000507076 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.63■■■□□ 2.01
CALCOCO2-209ENST00000507076 ROBO3Q96MS0 1386 aa27.62■■■□□ 2.01
CALCOCO2-209ENST00000507076 SMARCA5O60264 1052 aaPredicted RBP27.62■■■□□ 2.01
CALCOCO2-209ENST00000507076 ITGB8P26012 769 aa27.62■■■□□ 2.01
CALCOCO2-209ENST00000507076 RNF180Q86T96 592 aa27.62■■■□□ 2.01
CALCOCO2-209ENST00000507076 CDX2Q99626 313 aaPredicted RBP27.62■■■□□ 2.01
CALCOCO2-209ENST00000507076 ARPP21Q9UBL0 812 aaPredicted RBP27.62■■■□□ 2.01
CALCOCO2-209ENST00000507076 DIS3Q9Y2L1 958 aaKnown RBP27.62■■■□□ 2.01
CALCOCO2-209ENST00000507076 CLTBP09497 229 aa27.61■■■□□ 2.01
CALCOCO2-209ENST00000507076 ZNF865P0CJ78 1059 aaPredicted RBP27.61■■■□□ 2.01
CALCOCO2-209ENST00000507076 ZSCAN25Q6NSZ9 544 aa27.61■■■□□ 2.01
CALCOCO2-209ENST00000507076 A0A1W2PQ45 241 aaPredicted RBP27.6■■■□□ 2.01
CALCOCO2-209ENST00000507076 A0A1W2PQY0 241 aa27.6■■■□□ 2.01
CALCOCO2-209ENST00000507076 PQBP1O60828 265 aaKnown RBP27.6■■■□□ 2.01
CALCOCO2-209ENST00000507076 AKR1A1P14550 325 aa27.6■■■□□ 2.01
CALCOCO2-209ENST00000507076 COPB2P35606 906 aa27.6■■■□□ 2.01
CALCOCO2-209ENST00000507076 LRRCC1Q9C099 1032 aa27.6■■■□□ 2.01
CALCOCO2-209ENST00000507076 SEMA6BQ9H3T3 888 aa27.6■■■□□ 2.01
CALCOCO2-209ENST00000507076 TACC3Q9Y6A5 838 aa27.6■■■□□ 2.01
CALCOCO2-209ENST00000507076 EYSQ5T1H1 3165 aa27.59■■■□□ 2.01
CALCOCO2-209ENST00000507076 RASA1P20936 1047 aa27.59■■■□□ 2.01
CALCOCO2-209ENST00000507076 SLF1Q9BQI6 1058 aa27.59■■■□□ 2.01
CALCOCO2-209ENST00000507076 CNPY2Q9Y2B0 182 aa27.59■■■□□ 2.01
CALCOCO2-209ENST00000507076 SLC4A3P48751 1232 aa27.58■■■□□ 2.01
CALCOCO2-209ENST00000507076 EPHB4P54760 987 aa27.58■■■□□ 2.01
CALCOCO2-209ENST00000507076 SMAD3P84022 425 aaKnown RBP27.58■■■□□ 2.01
CALCOCO2-209ENST00000507076 SNRNP48Q6IEG0 339 aaKnown RBP27.58■■■□□ 2.01
CALCOCO2-209ENST00000507076 STRBPQ96SI9 672 aaKnown RBP27.58■■■□□ 2.01
CALCOCO2-209ENST00000507076 TEX13BQ9BXU2 312 aa27.58■■■□□ 2.01
CALCOCO2-209ENST00000507076 TTYH1Q9H313 450 aaPredicted RBP27.58■■■□□ 2.01
CALCOCO2-209ENST00000507076 ADAMTS4O75173 837 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms