RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TCTN2Q96GX1 697 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 FOXP3Q9BZS1 431 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 C19orf44Q9H6X5 657 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 SP110Q9HB58 689 aa5.79□□□□□ -1.48
HMGB1P29-201ENST00000505659 TIGD5Q53EQ6 642 aa5.78□□□□□ -1.48
HMGB1P29-201ENST00000505659 ZPBP2Q6X784 338 aa5.78□□□□□ -1.48
HMGB1P29-201ENST00000505659 USHBP1Q8N6Y0 703 aa5.78□□□□□ -1.48
HMGB1P29-201ENST00000505659 SYTL5Q8TDW5 730 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P29-201ENST00000505659 ASCC2Q9H1I8 757 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P29-201ENST00000505659 GOLGA2P5Q9HBQ8 144 aa5.78□□□□□ -1.48
HMGB1P29-201ENST00000505659 GFOD1Q9NXC2 390 aa5.78□□□□□ -1.48
HMGB1P29-201ENST00000505659 SUCOQ9UBS9 1254 aaKnown RBP5.78□□□□□ -1.48
HMGB1P29-201ENST00000505659 SHOXO15266 292 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 SIGLEC6O43699 453 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 FKTNO75072 461 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 HPXP02790 462 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 GLI1P08151 1106 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 IMPDH2P12268 514 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 GJA8P48165 433 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 SOX9P48436 509 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 MLANAQ16655 118 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 BBS9Q3SYG4 887 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 DCAF15Q66K64 600 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 UNC5AQ6ZN44 842 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 POU5F2Q8N7G0 328 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 RASGRP4Q8TDF6 673 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 G6PC3Q9BUM1 346 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 KCNK12Q9HB15 430 aa5.77□□□□□ -1.49
HMGB1P29-201ENST00000505659 TMEM82A0PJX8 343 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 LRRC10BA6NIK2 292 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 EFEMP2O95967 443 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 TP53P04637 393 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 SYPP08247 313 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 GUCY2CP25092 1073 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 RPL10P27635 214 aaKnown RBP5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 CTSKP43235 329 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 NASPP49321 788 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 GALK1P51570 392 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 AUHQ13825 339 aaKnown RBP5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 TMEM67Q5HYA8 995 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 INTS3Q68E01 1043 aaKnown RBP5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 PRR23BQ6ZRT6 265 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 CCDC144CPQ8IYA2 1237 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 TAB3Q8N5C8 712 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 RBBP8NLQ8NC74 664 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 DAGLBQ8NCG7 672 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 ABHD4Q8TB40 342 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 MYLIPQ8WY64 445 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 TM9SF2Q99805 663 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 RNF32Q9H0A6 362 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 CHST7Q9NS84 486 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 FBXL21Q9UKT6 434 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 TCFL5Q9UL49 500 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 PCDHB12Q9Y5F1 795 aa5.76□□□□□ -1.49
HMGB1P29-201ENST00000505659 LTBP3Q9NS15 1303 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 C8AP07357 584 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 RAC2P15153 192 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 PMS1P54277 932 aaKnown RBP5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 AXDND1Q5T1B0 1012 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 CRTC3Q6UUV7 619 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 MPZL3Q6UWV2 235 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 WAPLQ7Z5K2 1190 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 ZNF655Q8N720 491 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 ENOX1Q8TC92 643 aaKnown RBP5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 CCDC120Q96HB5 630 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 TGIF2Q9GZN2 237 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 CCSER2Q9H7U1 834 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 ZNF281Q9Y2X9 895 aa5.75□□□□□ -1.49
HMGB1P29-201ENST00000505659 USP2O75604 605 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 EIF6P56537 245 aaKnown RBP5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 MESP2Q0VG99 397 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 COL9A2Q14055 689 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 ZNF124Q15973 351 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 RNF111Q6ZNA4 994 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 KRTAP1-3Q8IUG1 177 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 C7orf61Q8IZ16 206 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 PDZD8Q8NEN9 1154 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 LINC01599Q8WXQ3 324 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 SHDQ96IW2 340 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 DHRS1Q96LJ7 313 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 DIRC2Q96SL1 478 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 SRRTQ9BXP5 876 aaKnown RBP5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 PCDHB10Q9UN67 800 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 INPP5FQ9Y2H2 1132 aa5.74□□□□□ -1.49
HMGB1P29-201ENST00000505659 NOTOA8MTQ0 251 aa5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 GIPRP48546 466 aa5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 RBM25P49756 843 aaKnown RBP5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 PCBP3P57721 371 aaKnown RBP5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 FAM169BQ8N8A8 192 aa5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 LINC00116Q8NCU8 138 aa5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 BRF1Q92994 677 aa5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 CRBNQ96SW2 442 aa5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 NSUN3Q9H649 340 aaKnown RBP5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 ZMYM5Q9UJ78 669 aa5.73□□□□□ -1.49
HMGB1P29-201ENST00000505659 A0A1W2PQH9 124 aa5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 SSU72P8A0A1W2PR75 194 aa5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 PSPNO60542 156 aa5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 ERCC5P28715 1186 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P29-201ENST00000505659 DHX38Q92620 1227 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms