RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 PTPRAP18433 802 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 PTPREP23469 700 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 LIFRP42702 1097 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 HUNKP57058 714 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 CAMK2BQ13554 666 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 COL9A3Q14050 684 aaPredicted RBP12.8□□□□□ -0.36
LINC00958-201ENST00000504230 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 ERO1BQ86YB8 467 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 ENAHQ8N8S7 591 aaPredicted RBP12.8□□□□□ -0.36
LINC00958-201ENST00000504230 ANKS1AQ92625 1134 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 SLC10A4Q96EP9 437 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 SLC4A5Q9BY07 1137 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 KAT14Q9H8E8 782 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 ELP3Q9H9T3 547 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
LINC00958-201ENST00000504230 CCDC69A6NI79 296 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 TOP1P11387 765 aaKnown RBP12.79□□□□□ -0.36
LINC00958-201ENST00000504230 EEF2P13639 858 aaKnown RBP12.79□□□□□ -0.36
LINC00958-201ENST00000504230 NOVP48745 357 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 PPATQ06203 517 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 SEC23AQ15436 765 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 NFXL1Q6ZNB6 911 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 BRF1Q92994 677 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 CLMNQ96JQ2 1002 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 WDR18Q9BV38 432 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 LY9Q9HBG7 655 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 VPS9D1Q9Y2B5 631 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 GREB1LQ9C091 1923 aaPredicted RBP12.79□□□□□ -0.36
LINC00958-201ENST00000504230 ATAD5Q96QE3 1844 aa12.79□□□□□ -0.36
LINC00958-201ENST00000504230 SPDYE5A6NIY4 337 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 SYNE3Q6ZMZ3 975 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 CLEC10AQ8IUN9 316 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 ZNF280CQ8ND82 737 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 MKL1Q969V6 931 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 FEZ1Q99689 392 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 TMEM47Q9BQJ4 181 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 AGXT2Q9BYV1 514 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.78□□□□□ -0.36
LINC00958-201ENST00000504230 ABT1Q9ULW3 272 aaKnown RBP12.78□□□□□ -0.36
LINC00958-201ENST00000504230 SYNPO2Q9UMS6 1093 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 TLL2Q9Y6L7 1015 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 OTOFQ9HC10 1997 aa12.78□□□□□ -0.36
LINC00958-201ENST00000504230 USP17L10C9JJH3 530 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 MCM2P49736 904 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 APLP1P51693 650 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 USP14P54578 494 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 AK2P54819 239 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 CATIPQ7Z7H3 387 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 SAPCD2Q86UD0 394 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.36
LINC00958-201ENST00000504230 HCSTQ9UBK5 93 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 TMX2Q9Y320 296 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 SLC12A7Q9Y666 1083 aa12.77□□□□□ -0.36
LINC00958-201ENST00000504230 SPP2Q13103 211 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 PPIL2Q13356 520 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 TOB2Q14106 344 aaPredicted RBP12.77□□□□□ -0.37
LINC00958-201ENST00000504230 SIAH1Q8IUQ4 282 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 LRRC47Q8N1G4 583 aaKnown RBP12.77□□□□□ -0.37
LINC00958-201ENST00000504230 PNMA1Q8ND90 353 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 ACER1Q8TDN7 264 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 OPTNQ96CV9 577 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 ADAM33Q9BZ11 813 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 GOPCQ9HD26 462 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.37
LINC00958-201ENST00000504230 KLF18A0A0U1RQI7 1052 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 A0A1W2PRG0 241 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 TRIM75PA6NK02 468 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 C19orf81C9J6K1 198 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 CXCL11O14625 94 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 RAD21O60216 631 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 CALM1P0DP23 149 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 CALM2P0DP24 149 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 CALM3P0DP25 149 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 ECE1P42892 770 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 ZNF157P51786 506 aaPredicted RBP12.76□□□□□ -0.37
LINC00958-201ENST00000504230 BACE1P56817 501 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 APOBRQ0VD83 1088 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 RGMBQ6NW40 437 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 KIAA1683Q9H0B3 1180 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
LINC00958-201ENST00000504230 NAP1L2Q9ULW6 460 aaPredicted RBP12.76□□□□□ -0.37
LINC00958-201ENST00000504230 F5H6K3 240 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 ZBTB43O43298 467 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 DDAH1O94760 285 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 ZBTB48P10074 688 aaPredicted RBP12.75□□□□□ -0.37
LINC00958-201ENST00000504230 RCAN1P53805 252 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 EVCP57679 992 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 KLRC3Q07444 240 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 GMCL1P1Q8NEA9 526 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
LINC00958-201ENST00000504230 WNK4Q96J92 1243 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 HHIPL1Q96JK4 782 aa12.75□□□□□ -0.37
LINC00958-201ENST00000504230 VCPKMTQ9H867 229 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms