RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 PRKG1Q13976 671 aa27.4■■□□□ 1.98
HMCES-204ENST00000502878 MCTP1Q6DN14 999 aa27.4■■□□□ 1.98
HMCES-204ENST00000502878 SPZ1Q9BXG8 430 aa27.4■■□□□ 1.98
HMCES-204ENST00000502878 TMX2Q9Y320 296 aa27.4■■□□□ 1.98
HMCES-204ENST00000502878 VEGFAP15692 232 aaPredicted RBP27.39■■□□□ 1.98
HMCES-204ENST00000502878 RESTQ13127 1097 aa27.39■■□□□ 1.98
HMCES-204ENST00000502878 TTBK2Q6IQ55 1244 aa27.39■■□□□ 1.98
HMCES-204ENST00000502878 ZKSCAN4Q969J2 545 aaPredicted RBP27.39■■□□□ 1.98
HMCES-204ENST00000502878 KLRG1Q96E93 195 aa27.39■■□□□ 1.98
HMCES-204ENST00000502878 DCAF8L1A6NGE4 600 aa27.39■■□□□ 1.97
HMCES-204ENST00000502878 SLC1A4P43007 532 aa27.39■■□□□ 1.97
HMCES-204ENST00000502878 DCAF4Q8WV16 495 aa27.39■■□□□ 1.97
HMCES-204ENST00000502878 SHISA4Q96DD7 197 aa27.39■■□□□ 1.97
HMCES-204ENST00000502878 SYNPO2Q9UMS6 1093 aa27.39■■□□□ 1.97
HMCES-204ENST00000502878 BAZ2BQ9UIF8 2168 aaKnown RBP27.38■■□□□ 1.97
HMCES-204ENST00000502878 POTEIP0CG38 1075 aa27.38■■□□□ 1.97
HMCES-204ENST00000502878 POTEJP0CG39 1038 aa27.38■■□□□ 1.97
HMCES-204ENST00000502878 MCM4P33991 863 aa27.38■■□□□ 1.97
HMCES-204ENST00000502878 TRIM29Q14134 588 aa27.38■■□□□ 1.97
HMCES-204ENST00000502878 GPATCH4Q5T3I0 446 aaKnown RBP27.38■■□□□ 1.97
HMCES-204ENST00000502878 FAM173BQ6P4H8 233 aa27.38■■□□□ 1.97
HMCES-204ENST00000502878 GINM1Q9NU53 330 aa27.38■■□□□ 1.97
HMCES-204ENST00000502878 ATAD5Q96QE3 1844 aa27.38■■□□□ 1.97
HMCES-204ENST00000502878 PFKFB3Q16875 520 aaPredicted RBP27.37■■□□□ 1.97
HMCES-204ENST00000502878 KIAA1755Q5JYT7 1200 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 SCYL3Q8IZE3 742 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 NUP88Q99567 741 aaPredicted RBP27.37■■□□□ 1.97
HMCES-204ENST00000502878 VAT1LQ9HCJ6 419 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 VPS54Q9P1Q0 977 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 ISY1Q9ULR0 285 aaKnown RBP27.37■■□□□ 1.97
HMCES-204ENST00000502878 USP2O75604 605 aaPredicted RBP27.37■■□□□ 1.97
HMCES-204ENST00000502878 SCG2P13521 617 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 SMARCA1P28370 1054 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 SPICE1Q8N0Z3 855 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 RGS22Q8NE09 1264 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 GMCL1Q96IK5 515 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 RRAGCQ9HB90 399 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 RBM27Q9P2N5 1060 aaKnown RBP27.37■■□□□ 1.97
HMCES-204ENST00000502878 KCNJ14Q9UNX9 436 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 ATP6V1DQ9Y5K8 247 aa27.37■■□□□ 1.97
HMCES-204ENST00000502878 ZYXQ15942 572 aaKnown RBP27.36■■□□□ 1.97
HMCES-204ENST00000502878 CDCA5Q96FF9 252 aa27.36■■□□□ 1.97
HMCES-204ENST00000502878 RIOX1Q9H6W3 641 aa27.36■■□□□ 1.97
HMCES-204ENST00000502878 CLEC11AQ9Y240 323 aa27.36■■□□□ 1.97
HMCES-204ENST00000502878 MYH6P13533 1939 aa27.36■■□□□ 1.97
HMCES-204ENST00000502878 SLC16A2P36021 539 aa27.35■■□□□ 1.97
HMCES-204ENST00000502878 ZSCAN16Q9H4T2 348 aaPredicted RBP27.35■■□□□ 1.97
HMCES-204ENST00000502878 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.35■■□□□ 1.973e-6■■■□□ 16.1
HMCES-204ENST00000502878 GOPCQ9HD26 462 aa27.35■■□□□ 1.97
HMCES-204ENST00000502878 HOMER1Q86YM7 354 aa27.34■■□□□ 1.97
HMCES-204ENST00000502878 SH2D4AQ9H788 454 aa27.34■■□□□ 1.97
HMCES-204ENST00000502878 VCPKMTQ9H867 229 aa27.34■■□□□ 1.97
HMCES-204ENST00000502878 KIF28PB7ZC32 967 aa27.33■■□□□ 1.97
HMCES-204ENST00000502878 MMP1P03956 469 aa27.33■■□□□ 1.97
HMCES-204ENST00000502878 KIF23Q02241 960 aaPredicted RBP27.33■■□□□ 1.97
HMCES-204ENST00000502878 DNM1Q05193 864 aaKnown RBP27.33■■□□□ 1.97
HMCES-204ENST00000502878 NBR1Q14596 966 aa27.33■■□□□ 1.97
HMCES-204ENST00000502878 RRP36Q96EU6 259 aaKnown RBP27.33■■□□□ 1.97
HMCES-204ENST00000502878 PIGSQ96S52 555 aa27.33■■□□□ 1.97
HMCES-204ENST00000502878 BMP3P12645 472 aa27.33■■□□□ 1.97
HMCES-204ENST00000502878 ADGRF4Q8IZF3 695 aa27.33■■□□□ 1.97
HMCES-204ENST00000502878 GPKOWQ92917 476 aaPredicted RBP eCLIP27.33■■□□□ 1.97
HMCES-204ENST00000502878 PICK1Q9NRD5 415 aa27.33■■□□□ 1.97
HMCES-204ENST00000502878 DOCK1Q14185 1865 aa27.32■■□□□ 1.96
HMCES-204ENST00000502878 XBP1P17861 261 aa27.32■■□□□ 1.96
HMCES-204ENST00000502878 PTPRAP18433 802 aa27.32■■□□□ 1.96
HMCES-204ENST00000502878 FEZ1Q99689 392 aa27.32■■□□□ 1.96
HMCES-204ENST00000502878 JMJD4Q9H9V9 463 aa27.32■■□□□ 1.96
HMCES-204ENST00000502878 MAP1SQ66K74 1059 aaPredicted RBP27.31■■□□□ 1.96
HMCES-204ENST00000502878 PHF20Q9BVI0 1012 aa27.31■■□□□ 1.96
HMCES-204ENST00000502878 PPP1R12BO60237 982 aaPredicted RBP27.31■■□□□ 1.96
HMCES-204ENST00000502878 NOL9Q5SY16 702 aaKnown RBP27.31■■□□□ 1.96
HMCES-204ENST00000502878 WWC2Q6AWC2 1192 aa27.31■■□□□ 1.96
HMCES-204ENST00000502878 CNPY2Q9Y2B0 182 aa27.31■■□□□ 1.96
HMCES-204ENST00000502878 USP17L10C9JJH3 530 aa27.3■■□□□ 1.96
HMCES-204ENST00000502878 TMEM232C9JQI7 657 aa27.3■■□□□ 1.96
HMCES-204ENST00000502878 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.3■■□□□ 1.96
HMCES-204ENST00000502878 HEATR3Q7Z4Q2 680 aa27.3■■□□□ 1.96
HMCES-204ENST00000502878 SEC63Q9UGP8 760 aaKnown RBP27.3■■□□□ 1.96
HMCES-204ENST00000502878 FAM83BQ5T0W9 1011 aa27.29■■□□□ 1.96
HMCES-204ENST00000502878 DIS3L2Q8IYB7 885 aaKnown RBP27.29■■□□□ 1.96
HMCES-204ENST00000502878 ZNF526Q8TF50 670 aaPredicted RBP27.29■■□□□ 1.96
HMCES-204ENST00000502878 GDPD2Q9HCC8 539 aa27.29■■□□□ 1.96
HMCES-204ENST00000502878 BTBD18B2RXH4 712 aa27.29■■□□□ 1.96
HMCES-204ENST00000502878 NCLP19338 710 aaKnown RBP27.29■■□□□ 1.96
HMCES-204ENST00000502878 NF2P35240 595 aa27.29■■□□□ 1.96
HMCES-204ENST00000502878 MAP3K9P80192 1104 aa27.29■■□□□ 1.96
HMCES-204ENST00000502878 TYW1BQ6NUM6 668 aa27.29■■□□□ 1.96
HMCES-204ENST00000502878 KIAA1683Q9H0B3 1180 aa27.29■■□□□ 1.96
HMCES-204ENST00000502878 NMRK2Q9NPI5 230 aa27.29■■□□□ 1.96
HMCES-204ENST00000502878 SPP2Q13103 211 aa27.28■■□□□ 1.96
HMCES-204ENST00000502878 DGKZQ13574 1117 aa27.28■■□□□ 1.96
HMCES-204ENST00000502878 VGLL4Q14135 290 aa27.28■■□□□ 1.96
HMCES-204ENST00000502878 SAFBQ15424 915 aaKnown RBP eCLIP27.28■■□□□ 1.96
HMCES-204ENST00000502878 OXER1Q8TDS5 423 aa27.28■■□□□ 1.96
HMCES-204ENST00000502878 WDR18Q9BV38 432 aa27.28■■□□□ 1.96
HMCES-204ENST00000502878 ZHX2Q9Y6X8 837 aa27.28■■□□□ 1.96
HMCES-204ENST00000502878 STXBP3O00186 592 aa27.28■■□□□ 1.96
HMCES-204ENST00000502878 IKQ13123 557 aaPredicted RBP27.28■■□□□ 1.96
HMCES-204ENST00000502878 MTMR2Q13614 643 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms