RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	CCDC144CP	Q8IYA2	1237 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	LRRC47	Q8N1G4	583 aa	Known RBP	14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	NUP133	Q8WUM0	1156 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	CDCA5	Q96FF9	252 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	GLIS2	Q9BZE0	524 aa	Predicted RBP	14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	MAD2L2	Q9UI95	211 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	DOCK1	Q14185	1865 aa		14.16	□□□□□ -0.14
MATR3-231	ENST00000502394	STK36	Q9NRP7	1315 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	ATAD5	Q96QE3	1844 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	MYH4	Q9Y623	1939 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	PLEKHA8P1	O95397	391 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	PDHB	P11177	359 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	MAP3K11	Q16584	847 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	SLC35G1	Q2M3R5	365 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	RASGRP2	Q7LDG7	609 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	LDHD	Q86WU2	507 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	NMRK2	Q9NPI5	230 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	CHMP5	Q9NZZ3	219 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	TMX2	Q9Y320	296 aa		14.15	□□□□□ -0.14
MATR3-231	ENST00000502394	CNTNAP5	Q8WYK1	1306 aa		14.15	□□□□□ -0.15
MATR3-231	ENST00000502394	CPLX1	O14810	134 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	CDKL5	O76039	1030 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	FMNL1	O95466	1100 aa	Predicted RBP	14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	KIF5B	P33176	963 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	RAB3GAP1	Q15042	981 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	CPLX2	Q6PUV4	134 aa	Known RBP	14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	SCYL3	Q8IZE3	742 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	STAG2	Q8N3U4	1231 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	SRBD1	Q8N5C6	995 aa	Known RBP	14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	GMCL1P1	Q8NEA9	526 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	CTCFL	Q8NI51	663 aa	Predicted RBP	14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	ACER1	Q8TDN7	264 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	WRNIP1	Q96S55	665 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	FZD1	Q9UP38	647 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	BOLA1	Q9Y3E2	137 aa		14.14	□□□□□ -0.15
MATR3-231	ENST00000502394	USP17L5	A8MUK1	530 aa		14.13	□□□□□ -0.15
MATR3-231	ENST00000502394	SMARCA1	P28370	1054 aa		14.13	□□□□□ -0.15
MATR3-231	ENST00000502394	ZNF543	Q08ER8	600 aa		14.13	□□□□□ -0.15
MATR3-231	ENST00000502394	PKP1	Q13835	747 aa		14.13	□□□□□ -0.15
MATR3-231	ENST00000502394	SLAIN1	Q8ND83	568 aa		14.13	□□□□□ -0.15
MATR3-231	ENST00000502394	RNF26	Q9BY78	433 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-231	ENST00000502394	ZDHHC9	Q9Y397	364 aa		14.13	□□□□□ -0.15
MATR3-231	ENST00000502394	OTOF	Q9HC10	1997 aa		14.13	□□□□□ -0.15
MATR3-231	ENST00000502394	BRD1	O95696	1058 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	PARP1	P09874	1014 aa	Known RBP	14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	PTPRA	P18433	802 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	SYT1	P21579	422 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	ECE1	P42892	770 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	GNAQ	P50148	359 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	ASPRV1	Q53RT3	343 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	KIAA1755	Q5JYT7	1200 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	LCE2D	Q5TA82	110 aa	Predicted RBP	14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	MAP1S	Q66K74	1059 aa	Predicted RBP	14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	USP17L2	Q6R6M4	530 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	CCDC84	Q86UT8	332 aa	Predicted RBP	14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	RGS22	Q8NE09	1264 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	DCAF4	Q8WV16	495 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	PHKB	Q93100	1093 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	DDX11	Q96FC9	970 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	GMCL1	Q96IK5	515 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	LZTS2	Q9BRK4	669 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	WDR18	Q9BV38	432 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	SPZ1	Q9BXG8	430 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	ARHGEF10L	Q9HCE6	1279 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	ORC3	Q9UBD5	711 aa	Predicted RBP	14.12	□□□□□ -0.15
MATR3-231	ENST00000502394	PHIP	Q8WWQ0	1821 aa		14.12	□□□□□ -0.15
MATR3-231	ENST00000502394		F5H6K3	240 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	UBE2Q2L	H0YL09	131 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	PRPF3	O43395	683 aa	Known RBP	14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	CYTH3	O43739	400 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	PPP1R12B	O60237	982 aa	Predicted RBP	14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	NDUFB10	O96000	172 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	MAP3K9	P80192	1104 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	NUCB2	P80303	420 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	ATP2B2	Q01814	1243 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	KLRC3	Q07444	240 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	PKN1	Q16512	942 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	GPATCH4	Q5T3I0	446 aa	Known RBP	14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	SLFN13	Q68D06	897 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	CMTR1	Q8N1G2	835 aa	Known RBP	14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	ZKSCAN4	Q969J2	545 aa	Predicted RBP	14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	KIAA1683	Q9H0B3	1180 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	RIOX1	Q9H6W3	641 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	VCPKMT	Q9H867	229 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	MTMR6	Q9Y217	621 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	SNCAIP	Q9Y6H5	919 aa		14.11	□□□□□ -0.15
MATR3-231	ENST00000502394	KLRF2	D3W0D1	207 aa		14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	STX6	O43752	255 aa		14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	PPFIA3	O75145	1194 aa		14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	PDIA4	P13667	645 aa	Known RBP	14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	PDC	P20941	246 aa		14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	NF2	P35240	595 aa		14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	SSRP1	Q08945	709 aa	Known RBP	14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	VGLL4	Q14135	290 aa		14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	SLC26A6	Q9BXS9	759 aa		14.1	□□□□□ -0.15
MATR3-231	ENST00000502394	SH2D4A	Q9H788	454 aa		14.1	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms