RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ZBED6P86452 979 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 PDCLQ13371 301 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 NCAPHQ15003 741 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 NCAPH2Q6IBW4 605 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 SH2D3CQ8N5H7 860 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 CCDC12Q8WUD4 166 aaPredicted RBP6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 SLC40A1Q9NP59 571 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 LNPEPQ9UIQ6 1025 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 LIMCH1Q9UPQ0 1083 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 MAPK8IP1Q9UQF2 711 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 SLIT3O75094 1523 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 SALL3Q9BXA9 1300 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 EBAG9O00559 213 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 KRT85P78386 507 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 MFSD4BQ5TF39 518 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 FAM71BQ8TC56 605 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 RRP36Q96EU6 259 aaKnown RBP6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 SH3GL3Q99963 347 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 TFR2Q9UP52 801 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 L3MBTL1Q9Y468 752 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 NEDD4P46934 1319 aa6.5□□□□□ -1.37
SOX2-OT-218ENST00000498731 LOC102724428A0A0B4J2F2 783 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 A0A1B0GVL5 298 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 TLDC2A0PJX2 215 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 SHOX2O60902 331 aaPredicted RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 TAF5LO75529 589 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 PECAM1P16284 738 aaPredicted RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 SEC24CP53992 1094 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 SIK1P57059 783 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 HAND2P61296 217 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 APBA1Q02410 837 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 MTA1Q13330 715 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 TSNAXIP1Q2TAA8 658 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ATL3Q6DD88 541 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 Q6ZUG5 572 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ANKRD23Q86SG2 305 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ANKRD18AQ8IVF6 992 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 FMNL3Q8IVF7 1028 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 CCDC13Q8IYE1 715 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 STAMBPL1Q96FJ0 436 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ZNF512BQ96KM6 892 aaPredicted RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 EPAS1Q99814 870 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 LRRC27Q9C0I9 530 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 NBPF3Q9H094 633 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 OSBPL3Q9H4L5 887 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 SPATS2LQ9NUQ6 558 aaKnown RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 HAUS2Q9NVX0 235 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 STAP2Q9UGK3 403 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 RAB21Q9UL25 225 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 RBM8AQ9Y5S9 174 aaKnown RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 A0A0D9SFI3 127 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 DNM1LO00429 736 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 OATP04181 439 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ITGA6P23229 1130 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ADORA1P30542 326 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ATP1A2P50993 1020 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 GNGT1P63211 74 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 PI16Q6UXB8 463 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 DDX27Q96GQ7 796 aaKnown RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 NLRP3Q96P20 1036 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 TSPAN18Q96SJ8 248 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 TSGA10Q9BZW7 698 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 GREM2Q9H772 168 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 TFCP2L1Q9NZI6 479 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 FBXO9Q9UK97 447 aaPredicted RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 HPCAL4Q9UM19 191 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 OVOS2A0A0G2JMS6 1433 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ANKRD18BA2A2Z9 1011 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 GOLGA6L4A6NEF3 574 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 GRXCR2A6NFK2 248 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 SPDYE3A6NKU9 549 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 EYA2O00167 538 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ATP2C2O75185 946 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 FUT4P22083 530 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 TUBP50607 506 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 PLEKHG6Q3KR16 790 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 CEP85LQ5SZL2 805 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 AKNAD1Q5T1N1 836 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 LDLRAD1Q5T700 205 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 MSL1Q68DK7 614 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 SDE2Q6IQ49 451 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 CHST3Q7LGC8 479 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 CDC5LQ99459 802 aaKnown RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 IRF2BPLQ9H1B7 796 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 FARP1Q9Y4F1 1045 aaPredicted RBP6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 PCDHGA4Q9Y5G9 962 aa6.49□□□□□ -1.37
SOX2-OT-218ENST00000498731 ATRNO75882 1429 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 LRRC10BA6NIK2 292 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 LINGO3P0C6S8 592 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 CRKLP46109 303 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 RWDD2BP57060 319 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 MTX1Q13505 466 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 BRD3Q15059 726 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 RAB11FIP4Q86YS3 637 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 DRAXINQ8NBI3 349 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 OR8K1Q8NGG5 319 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 ARL8AQ96BM9 186 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 SLC4A9Q96Q91 983 aa6.48□□□□□ -1.37
SOX2-OT-218ENST00000498731 NUP58Q9BVL2 599 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms