RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 APBA2Q99767 749 aa7.26□□□□□ -1.25
VPS36-206ENST00000497149 PRDM14Q9GZV8 571 aa7.26□□□□□ -1.25
VPS36-206ENST00000497149 KLHL25Q9H0H3 589 aa7.26□□□□□ -1.25
VPS36-206ENST00000497149 PCDHB12Q9Y5F1 795 aa7.26□□□□□ -1.25
VPS36-206ENST00000497149 FOSL1P15407 271 aa7.25□□□□□ -1.25
VPS36-206ENST00000497149 ITIH2P19823 946 aa7.25□□□□□ -1.25
VPS36-206ENST00000497149 SNW1Q13573 536 aaKnown RBP7.25□□□□□ -1.25
VPS36-206ENST00000497149 ARTNQ5T4W7 220 aa7.25□□□□□ -1.25
VPS36-206ENST00000497149 ADAT2Q7Z6V5 191 aaKnown RBP7.25□□□□□ -1.25
VPS36-206ENST00000497149 KRTAP4-8Q9BYQ9 185 aa7.25□□□□□ -1.25
VPS36-206ENST00000497149 EPN3Q9H201 632 aa7.25□□□□□ -1.25
VPS36-206ENST00000497149 GP6Q9HCN6 339 aa7.25□□□□□ -1.25
VPS36-206ENST00000497149 ZC3H7BQ9UGR2 993 aaKnown RBP7.25□□□□□ -1.25
VPS36-206ENST00000497149 PLAGL2Q9UPG8 496 aa7.25□□□□□ -1.25
VPS36-206ENST00000497149 ST14Q9Y5Y6 855 aa7.25□□□□□ -1.25
VPS36-206ENST00000497149 CEACAM5P06731 702 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 NAT2P11245 290 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 CDKAL1Q5VV42 579 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 SPACA3Q8IXA5 215 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 ZNF513Q8N8E2 541 aaPredicted RBP7.24□□□□□ -1.25
VPS36-206ENST00000497149 FGD4Q96M96 766 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 DNAJC7Q99615 494 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 GPR62Q9BZJ7 368 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 GBP3Q9H0R5 595 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 DUSP15Q9H1R2 295 aaPredicted RBP7.24□□□□□ -1.25
VPS36-206ENST00000497149 PRR13Q9NZ81 148 aa7.24□□□□□ -1.25
VPS36-206ENST00000497149 A0A087WZG4 1122 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 PPM1BO75688 479 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 TGFB1P01137 390 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 SRFP11831 508 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 ITGA4P13612 1032 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 HOXA10P31260 410 aaPredicted RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 ZNF445P59923 1031 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 IFRD2Q12894 506 aaPredicted RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 NMIQ13287 307 aaPredicted RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 IFI16Q16666 785 aaKnown RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 SV2CQ496J9 727 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 MTERF2Q49AM1 385 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 NOL9Q5SY16 702 aaKnown RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 TMC3Q7Z5M5 1100 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 PLD6Q8N2A8 252 aaKnown RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 ENOX1Q8TC92 643 aaKnown RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 NETO1Q8TDF5 533 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 ZNF669Q96BR6 464 aaPredicted RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 ASCC2Q9H1I8 757 aaPredicted RBP7.23□□□□□ -1.25
VPS36-206ENST00000497149 GFOD1Q9NXC2 390 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 WHRNQ9P202 907 aa7.23□□□□□ -1.25
VPS36-206ENST00000497149 SHISA3A0PJX4 238 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 SIGLEC6O43699 453 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 SLC10A6Q3KNW5 377 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 GIMAP6Q6P9H5 292 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 SPATC1Q76KD6 591 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 BRF1Q92994 677 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 RCC1LQ96I51 464 aaKnown RBP7.22□□□□□ -1.25
VPS36-206ENST00000497149 HSPA12BQ96MM6 686 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 APEX2Q9UBZ4 518 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 ZMYM5Q9UJ78 669 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 SNX11Q9Y5W9 270 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 FHOD1Q9Y613 1164 aa7.22□□□□□ -1.25
VPS36-206ENST00000497149 TMEM265A0A087WTH1 108 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 LOC105371045A0A1W2PR82 267 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 PRAMEF1O95521 474 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 CLCN7P51798 805 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 LRP8Q14114 963 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 CLEC16AQ2KHT3 1053 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 ARHGEF39Q8N4T4 335 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 SYTL5Q8TDW5 730 aaPredicted RBP7.21□□□□□ -1.26
VPS36-206ENST00000497149 TRIT1Q9H3H1 467 aaKnown RBP7.21□□□□□ -1.26
VPS36-206ENST00000497149 ZFP64Q9NPA5 681 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 CHST7Q9NS84 486 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 GPATCH2Q9NW75 528 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 DIS3Q9Y2L1 958 aaKnown RBP7.21□□□□□ -1.26
VPS36-206ENST00000497149 SUGT1Q9Y2Z0 365 aa7.21□□□□□ -1.26
VPS36-206ENST00000497149 H3BS24 57 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 THAP5Q7Z6K1 395 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 LILRB2Q8N423 598 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 FIBCD1Q8N539 461 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 DAGLBQ8NCG7 672 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 LRRN4CLQ8ND94 238 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 BVESQ8NE79 360 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 ADCY4Q8NFM4 1077 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 UBE2FQ969M7 185 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 SEMA3GQ9NS98 782 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 ZSWIM5Q9P217 1185 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 LRP2BPQ9P2M1 347 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 PFDN2Q9UHV9 154 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 RNF112Q9ULX5 631 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 MINPP1Q9UNW1 487 aa7.2□□□□□ -1.26
VPS36-206ENST00000497149 SHROOM4Q9ULL8 1493 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 SCO2A0A1W2PP80 73 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 TLDC2A0PJX2 215 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 IQCA1LA6NCM1 817 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 WASH4PA8MWX3 477 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 AGRPO00253 132 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 DIAPH1O60610 1272 aaKnown RBP7.19□□□□□ -1.26
VPS36-206ENST00000497149 ITGAVP06756 1048 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 GRIK1P39086 918 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 SSRP1Q08945 709 aaKnown RBP7.19□□□□□ -1.26
VPS36-206ENST00000497149 MSMPQ1L6U9 139 aa7.19□□□□□ -1.26
VPS36-206ENST00000497149 INTS5Q6P9B9 1019 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms