RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 NBPF3Q9H094 633 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 HOXC10Q9NYD6 342 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 ANAPC4Q9UJX5 808 aa17.44■□□□□ 0.38
ATG4B-224ENST00000494132 HIP1O00291 1037 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 TTLL1O95922 423 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 CCL5P13501 91 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 MFAP1P55081 439 aaKnown RBP17.43■□□□□ 0.38
ATG4B-224ENST00000494132 UBXN2AP68543 259 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 CCNA1P78396 465 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 TBC1D10CQ8IV04 446 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 NUDT12Q9BQG2 462 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 MOV10L1Q9BXT6 1211 aaKnown RBP17.43■□□□□ 0.38
ATG4B-224ENST00000494132 RNF208Q9H0X6 261 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 UNC93B1Q9H1C4 597 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 ISY1Q9ULR0 285 aaKnown RBP17.43■□□□□ 0.38
ATG4B-224ENST00000494132 STX8Q9UNK0 236 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 MTMR7Q9Y216 660 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 ZMYM6O95789 1325 aa17.43■□□□□ 0.38
ATG4B-224ENST00000494132 SMCHD1A6NHR9 2005 aa17.42■□□□□ 0.38
ATG4B-224ENST00000494132 PXYLP1Q8TE99 480 aa17.42■□□□□ 0.38
ATG4B-224ENST00000494132 TRIB2Q92519 343 aa17.42■□□□□ 0.38
ATG4B-224ENST00000494132 SPATC1LQ9H0A9 340 aa17.42■□□□□ 0.38
ATG4B-224ENST00000494132 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
ATG4B-224ENST00000494132 ORC4O43929 436 aa17.41■□□□□ 0.38
ATG4B-224ENST00000494132 TMEM132BQ14DG7 1078 aa17.41■□□□□ 0.38
ATG4B-224ENST00000494132 CCL14Q16627 93 aa17.41■□□□□ 0.38
ATG4B-224ENST00000494132 SOCS4Q8WXH5 440 aa17.41■□□□□ 0.38
ATG4B-224ENST00000494132 PPP1R9AQ9ULJ8 1098 aa17.41■□□□□ 0.38
ATG4B-224ENST00000494132 FRMPD3Q5JV73 1810 aa17.41■□□□□ 0.38
ATG4B-224ENST00000494132 NEDD4P46934 1319 aa17.41■□□□□ 0.38
ATG4B-224ENST00000494132 FGRP09769 529 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 ERCC3P19447 782 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 MORN1Q5T089 497 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 NCAPG2Q86XI2 1143 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 MKL1Q969V6 931 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 SHISA4Q96DD7 197 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 SLF1Q9BQI6 1058 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 IVNS1ABPQ9Y6Y0 642 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 ZNF236Q9UL36 1845 aa17.4■□□□□ 0.38
ATG4B-224ENST00000494132 HMGCRP04035 888 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 PTPREP23469 700 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 CHMLP26374 656 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 RGS2P41220 211 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 MAP2K5Q13163 448 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 AKNAD1Q5T1N1 836 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 MFSD6Q6ZSS7 791 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 MB21D1Q8N884 522 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 USP6NLQ92738 828 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 KIFC2Q96AC6 838 aa17.39■□□□□ 0.37
ATG4B-224ENST00000494132 TNRC18O15417 2968 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-224ENST00000494132 VWA5AO00534 786 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 ZNF213O14771 459 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 CENPQQ7L2Z9 268 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-224ENST00000494132 GMCL1P1Q8NEA9 526 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 STAG1Q8WVM7 1258 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 DEFB118Q96PH6 123 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 APBA2Q99767 749 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 ZKSCAN3Q9BRR0 538 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 DSCC1Q9BVC3 393 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 ADAMTS5Q9UNA0 930 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 MCM3APO60318 1980 aa17.38■□□□□ 0.37
ATG4B-224ENST00000494132 MKI67P46013 3256 aaKnown RBP17.37■□□□□ 0.37
ATG4B-224ENST00000494132 GJB1P08034 283 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 BMP3P12645 472 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 ZKSCAN1P17029 563 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-224ENST00000494132 MCCP23508 829 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 GRB14Q14449 540 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 KCTD1Q719H9 257 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 CPXCR1Q8N123 301 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 REPS2Q8NFH8 660 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 NPLOC4Q8TAT6 608 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 U2AF1L4Q8WU68 220 aaKnown RBP17.37■□□□□ 0.37
ATG4B-224ENST00000494132 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.37
ATG4B-224ENST00000494132 FLRT1Q9NZU1 646 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 ZNF214Q9UL59 606 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-224ENST00000494132 MYH6P13533 1939 aa17.37■□□□□ 0.37
ATG4B-224ENST00000494132 SLC15A5A6NIM6 579 aa17.36■□□□□ 0.37
ATG4B-224ENST00000494132 TMEM232C9JQI7 657 aa17.36■□□□□ 0.37
ATG4B-224ENST00000494132 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
ATG4B-224ENST00000494132 ADORA2AP29274 412 aa17.36■□□□□ 0.37
ATG4B-224ENST00000494132 PTH1RQ03431 593 aa17.36■□□□□ 0.37
ATG4B-224ENST00000494132 SHCBP1Q8NEM2 672 aa17.36■□□□□ 0.37
ATG4B-224ENST00000494132 B4E1Z4 1266 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 KDM4AO75164 1064 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 XRCC5P13010 732 aaKnown RBP17.35■□□□□ 0.37
ATG4B-224ENST00000494132 STAT3P40763 770 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 SLC1A4P43007 532 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 GJA8P48165 433 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 IKQ13123 557 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-224ENST00000494132 RIOX2Q8IUF8 465 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 PRPF38AQ8NAV1 312 aaKnown RBP17.35■□□□□ 0.37
ATG4B-224ENST00000494132 TMEM47Q9BQJ4 181 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 RNF41Q9H4P4 317 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-224ENST00000494132 RAVER2Q9HCJ3 691 aaKnown RBP17.35■□□□□ 0.37
ATG4B-224ENST00000494132 RAD50Q92878 1312 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 ALPK3Q96L96 1907 aa17.35■□□□□ 0.37
ATG4B-224ENST00000494132 COBLO75128 1261 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms