RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 LHX8Q68G74 356 aa17.51■□□□□ 0.39
ATG4B-223ENST00000493618 GIMAP6Q6P9H5 292 aa17.51■□□□□ 0.39
ATG4B-223ENST00000493618 IFNL3Q8IZI9 196 aa17.51■□□□□ 0.39
ATG4B-223ENST00000493618 PFASO15067 1338 aa17.5■□□□□ 0.39
ATG4B-223ENST00000493618 PATL2C9JE40 543 aaKnown RBP17.5■□□□□ 0.39
ATG4B-223ENST00000493618 COBLO75128 1261 aa17.5■□□□□ 0.39
ATG4B-223ENST00000493618 HOXC6P09630 235 aa17.5■□□□□ 0.39
ATG4B-223ENST00000493618 GNAT2P19087 354 aa17.5■□□□□ 0.39
ATG4B-223ENST00000493618 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
ATG4B-223ENST00000493618 SHCBP1Q8NEM2 672 aa17.5■□□□□ 0.39
ATG4B-223ENST00000493618 TRPV1Q8NER1 839 aa17.5■□□□□ 0.39
ATG4B-223ENST00000493618 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-223ENST00000493618 ZMYND8Q9ULU4 1186 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-223ENST00000493618 SALL3Q9BXA9 1300 aa17.49■□□□□ 0.39
ATG4B-223ENST00000493618 LRRFIP1Q32MZ4 808 aaKnown RBP17.49■□□□□ 0.39
ATG4B-223ENST00000493618 ZMYM1Q5SVZ6 1142 aa17.49■□□□□ 0.39
ATG4B-223ENST00000493618 CCDC129Q6ZRS4 1044 aa17.49■□□□□ 0.39
ATG4B-223ENST00000493618 STRNO43815 780 aa17.48■□□□□ 0.39
ATG4B-223ENST00000493618 SYN1P17600 705 aa17.48■□□□□ 0.39
ATG4B-223ENST00000493618 ANO1Q5XXA6 986 aa17.48■□□□□ 0.39
ATG4B-223ENST00000493618 ZNF444Q8N0Y2 327 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-223ENST00000493618 MROH8Q9H579 483 aa17.48■□□□□ 0.39
ATG4B-223ENST00000493618 CLIP2Q9UDT6 1046 aa17.48■□□□□ 0.39
ATG4B-223ENST00000493618 STAP2Q9UGK3 403 aa17.48■□□□□ 0.39
ATG4B-223ENST00000493618 DDX20Q9UHI6 824 aaKnown RBP17.48■□□□□ 0.39
ATG4B-223ENST00000493618 PPP1R9AQ9ULJ8 1098 aa17.48■□□□□ 0.39
ATG4B-223ENST00000493618 DNAH12Q6ZR08 3092 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 VWA5AO00534 786 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 FAM47AQ5JRC9 791 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 PRAMEF19Q5SWL8 479 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 NACAP1Q9BZK3 213 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 NAPBQ9H115 298 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 PRO3102Q9H379 93 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 NYAP2Q9P242 653 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 ADAMTS5Q9UNA0 930 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 TRIOBPQ9H2D6 2365 aa17.47■□□□□ 0.39
ATG4B-223ENST00000493618 IGKV6D-41A0A0C4DH26 115 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 F5H6K3 240 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 NDUFB10O96000 172 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 COL6A1P12109 1028 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 FCER1AP12319 257 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 CYBAP13498 195 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 KLRC3Q07444 240 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 OLFML2BQ68BL8 750 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.39
ATG4B-223ENST00000493618 CHMP4CQ96CF2 233 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 CEP95Q96GE4 821 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 MMP19Q99542 508 aa17.46■□□□□ 0.39
ATG4B-223ENST00000493618 SLC25A27O95847 323 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 IGHA2P01877 340 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 PGK2P07205 417 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 STAT3P40763 770 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 CTDSPL2Q05D32 466 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 PPARAQ07869 468 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 HDAC1Q13547 482 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-223ENST00000493618 LRRC26Q2I0M4 334 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 RIOX2Q8IUF8 465 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 REPS2Q8NFH8 660 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 MAML3Q96JK9 1138 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 SLF1Q9BQI6 1058 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 INCENPQ9NQS7 918 aa17.45■□□□□ 0.38
ATG4B-223ENST00000493618 FOXP2O15409 715 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 TSPY3P0CV98 308 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 TSPY8P0CW00 308 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 PDE1AP54750 535 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 PDE4BQ07343 736 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 VPS53Q5VIR6 699 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 ABRAQ8N0Z2 381 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 SENP6Q9GZR1 1112 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-223ENST00000493618 ZNF287Q9HBT7 754 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 SLC5A4Q9NY91 659 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 MTMR4Q9NYA4 1195 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 ZNF214Q9UL59 606 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-223ENST00000493618 MCM3APO60318 1980 aa17.44■□□□□ 0.38
ATG4B-223ENST00000493618 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
ATG4B-223ENST00000493618 MYCNP04198 464 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-223ENST00000493618 TFAP4Q01664 338 aa17.43■□□□□ 0.38
ATG4B-223ENST00000493618 GJC2Q5T442 439 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-223ENST00000493618 B4GALNT3Q6L9W6 998 aa17.43■□□□□ 0.38
ATG4B-223ENST00000493618 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
ATG4B-223ENST00000493618 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
ATG4B-223ENST00000493618 LNPKQ9C0E8 428 aa17.43■□□□□ 0.38
ATG4B-223ENST00000493618 ISY1Q9ULR0 285 aaKnown RBP17.43■□□□□ 0.38
ATG4B-223ENST00000493618 MSCO60682 206 aa17.42■□□□□ 0.38
ATG4B-223ENST00000493618 TTLL1O95922 423 aa17.42■□□□□ 0.38
ATG4B-223ENST00000493618 SLC3A2P08195 630 aaKnown RBP17.42■□□□□ 0.38
ATG4B-223ENST00000493618 ATN1P54259 1190 aaPredicted RBP17.42■□□□□ 0.38
ATG4B-223ENST00000493618 KCTD2Q14681 263 aa17.42■□□□□ 0.38
ATG4B-223ENST00000493618 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
ATG4B-223ENST00000493618 CPXCR1Q8N123 301 aa17.42■□□□□ 0.38
ATG4B-223ENST00000493618 NEDD1Q8NHV4 660 aa17.42■□□□□ 0.38
ATG4B-223ENST00000493618 RIPK3Q9Y572 518 aa17.42■□□□□ 0.38
ATG4B-223ENST00000493618 TACC3Q9Y6A5 838 aa17.42■□□□□ 0.38
ATG4B-223ENST00000493618 PLIN4Q96Q06 1357 aa17.41■□□□□ 0.38
ATG4B-223ENST00000493618 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
ATG4B-223ENST00000493618 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
ATG4B-223ENST00000493618 MKL1Q969V6 931 aa17.41■□□□□ 0.38
ATG4B-223ENST00000493618 FAM227BQ96M60 508 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms