RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 RRP36Q96EU6 259 aaKnown RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 CABP5Q9NP86 173 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 ZNF70Q9UC06 446 aaPredicted RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 CLIP2Q9UDT6 1046 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 SEC63Q9UGP8 760 aaKnown RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 BCS1LQ9Y276 419 aa10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 ZBTB12Q9Y330 459 aaPredicted RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 MORC2Q9Y6X9 1032 aaPredicted RBP10.5□□□□□ -0.73
SMARCC1-208ENST00000492896 A0A1B0GVL5 298 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 CLRN2A0PK11 232 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 PSDA5PKW4 1024 aaPredicted RBP10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 TRIM75PA6NK02 468 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 STXBP3O00186 592 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 SNHG28P0DPA3 235 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 PFKFB1P16118 471 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 NDUFA8P51970 172 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 ATP2B2Q01814 1243 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 TYRO3Q06418 890 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 CXCL9Q07325 125 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 CCDC173Q0VFZ6 552 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 SNW1Q13573 536 aaKnown RBP10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 TNIP1Q15025 636 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 WWC2Q6AWC2 1192 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 TATDN1Q6P1N9 297 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 SASS6Q6UVJ0 657 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 TMEM179Q6ZVK1 233 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 HEATR3Q7Z4Q2 680 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 CKAP2LQ8IYA6 745 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 BLIDQ8IZY5 108 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 DAGLBQ8NCG7 672 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 FAM151AQ8WW52 585 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 BARHL2Q9NY43 387 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 FRMPD2Q68DX3 1309 aaPredicted RBP10.49□□□□□ -0.73
SMARCC1-208ENST00000492896 FAM237AA0A1B0GTK4 181 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 TCP10L2B9ZVM9 353 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 hCG_1984214I3L0E3 225 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 MYO1BO43795 1136 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 ATP2B1P20020 1258 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 PTGER2P43116 358 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 TRAPPC10P48553 1259 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 MMP14P50281 582 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 ZNF543Q08ER8 600 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 CCDC96Q2M329 555 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 ABCB5Q2M3G0 1257 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 UVSSAQ2YD98 709 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 TTC38Q5R3I4 469 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 GPATCH4Q5T3I0 446 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 FKBP1CQ5VVH2 108 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 RESP18Q5W5W9 173 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 HOMER1Q86YM7 354 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 ZNF713Q8N859 430 aaPredicted RBP10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 CSRNP1Q96S65 589 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 RIOX1Q9H6W3 641 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 KANSL2Q9H9L4 492 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 NYAP2Q9P242 653 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 HERC5Q9UII4 1024 aaKnown RBP10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 PCDHB6Q9Y5E3 794 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 SBF1O95248 1867 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 CNTNAP1P78357 1384 aa10.48□□□□□ -0.73
SMARCC1-208ENST00000492896 GDF11O95390 407 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 SLURP2P0DP57 97 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 VEGFAP15692 232 aaPredicted RBP10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 PTPREP23469 700 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 RPS12P25398 132 aaKnown RBP10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 SYKP43405 635 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 NAPAP54920 295 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 RASSF7Q02833 373 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 ICA1Q05084 483 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 EARS2Q5JPH6 523 aaKnown RBP10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 RBM26Q5T8P6 1007 aaKnown RBP10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 TYW1BQ6NUM6 668 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 SHC4Q6S5L8 630 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 PIK3AP1Q6ZUJ8 805 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 DCAF4Q8WV16 495 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 ZBED3Q96IU2 234 aaPredicted RBP10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 CPVLQ9H3G5 476 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 VEZTQ9HBM0 779 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 GPCPD1Q9NPB8 672 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 FAM13BQ9NYF5 915 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 FBXO2Q9UK22 296 aaPredicted RBP10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 HPSEQ9Y251 543 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 MRVI1Q9Y6F6 885 aa10.47□□□□□ -0.73
SMARCC1-208ENST00000492896 CCDC194A0A1B0GVG4 234 aa10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 ESYT2A0FGR8 921 aa10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 ZNF202O95125 648 aa10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 EEF2P13639 858 aaKnown RBP10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 SEPT2Q15019 361 aa10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 STX1AQ16623 288 aa10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 NOM1Q5C9Z4 860 aaKnown RBP10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 PPP1R18Q6NYC8 613 aa10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 FAM83AQ86UY5 434 aa10.46□□□□□ -0.73
SMARCC1-208ENST00000492896 ZNF579Q8NAF0 562 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms