RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 ZNF543Q08ER8 600 aa16.82■□□□□ 0.28
GCA-210ENST00000487445 GMCL1P1Q8NEA9 526 aa16.82■□□□□ 0.28
GCA-210ENST00000487445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.28
GCA-210ENST00000487445 WASF1Q92558 559 aa16.82■□□□□ 0.28
GCA-210ENST00000487445 TNPO1Q92973 898 aaKnown RBP16.82■□□□□ 0.28
GCA-210ENST00000487445 NUP88Q99567 741 aaPredicted RBP16.82■□□□□ 0.28
GCA-210ENST00000487445 LZTS2Q9BRK4 669 aa16.82■□□□□ 0.28
GCA-210ENST00000487445 SH2D4AQ9H788 454 aa16.82■□□□□ 0.28
GCA-210ENST00000487445 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
GCA-210ENST00000487445 GINM1Q9NU53 330 aa16.82■□□□□ 0.28
GCA-210ENST00000487445 MTMR6Q9Y217 621 aa16.82■□□□□ 0.28
GCA-210ENST00000487445 CNTNAP5Q8WYK1 1306 aa16.81■□□□□ 0.28
GCA-210ENST00000487445 STK36Q9NRP7 1315 aa16.81■□□□□ 0.28
GCA-210ENST00000487445 WDR90Q96KV7 1748 aa16.81■□□□□ 0.28
GCA-210ENST00000487445 PRPF3O43395 683 aaKnown RBP16.81■□□□□ 0.28
GCA-210ENST00000487445 ZSCAN22P10073 491 aaPredicted RBP16.81■□□□□ 0.28
GCA-210ENST00000487445 IREB2P48200 963 aaKnown RBP16.81■□□□□ 0.28
GCA-210ENST00000487445 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
GCA-210ENST00000487445 FMR1Q06787 632 aaKnown RBP eCLIP16.81■□□□□ 0.28
GCA-210ENST00000487445 FOXD4L6Q3SYB3 417 aaPredicted RBP16.81■□□□□ 0.28
GCA-210ENST00000487445 GPATCH4Q5T3I0 446 aaKnown RBP16.81■□□□□ 0.28
GCA-210ENST00000487445 TTBK2Q6IQ55 1244 aa16.81■□□□□ 0.28
GCA-210ENST00000487445 FOXD4L3Q6VB84 417 aaPredicted RBP16.81■□□□□ 0.28
GCA-210ENST00000487445 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
GCA-210ENST00000487445 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
GCA-210ENST00000487445 ZHX2Q9Y6X8 837 aa16.81■□□□□ 0.28
GCA-210ENST00000487445 CYTH3O43739 400 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 PTPRAP18433 802 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 SLC16A2P36021 539 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 IKQ13123 557 aaPredicted RBP16.8■□□□□ 0.28
GCA-210ENST00000487445 FERMT3Q86UX7 667 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 DCAF4Q8WV16 495 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 CSADQ9Y600 493 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 PDIA4P13667 645 aaKnown RBP16.8■□□□□ 0.28
GCA-210ENST00000487445 SPP2Q13103 211 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 TRIM29Q14134 588 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 VGLL4Q14135 290 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 SLC35G1Q2M3R5 365 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 MCTP1Q6DN14 999 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
GCA-210ENST00000487445 GMCL1Q96IK5 515 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 VCPKMTQ9H867 229 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 AS3MTQ9HBK9 375 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 SYNPO2Q9UMS6 1093 aa16.8■□□□□ 0.28
GCA-210ENST00000487445 TRIM75PA6NK02 468 aa16.79■□□□□ 0.28
GCA-210ENST00000487445 BMP3P12645 472 aa16.79■□□□□ 0.28
GCA-210ENST00000487445 PKN1Q16512 942 aa16.79■□□□□ 0.28
GCA-210ENST00000487445 KIAA1755Q5JYT7 1200 aa16.79■□□□□ 0.28
GCA-210ENST00000487445 USP17L10C9JJH3 530 aa16.78■□□□□ 0.28
GCA-210ENST00000487445 TMEM232C9JQI7 657 aa16.78■□□□□ 0.28
GCA-210ENST00000487445 F13A1P00488 732 aa16.78■□□□□ 0.28
GCA-210ENST00000487445 MTMR2Q13614 643 aa16.78■□□□□ 0.28
GCA-210ENST00000487445 FBXO18Q8NFZ0 1043 aa16.78■□□□□ 0.28
GCA-210ENST00000487445 RRP36Q96EU6 259 aaKnown RBP16.78■□□□□ 0.28
GCA-210ENST00000487445 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
GCA-210ENST00000487445 SCN4AP35499 1836 aa16.78■□□□□ 0.28
GCA-210ENST00000487445 DGKZQ13574 1117 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 NOL9Q5SY16 702 aaKnown RBP16.77■□□□□ 0.28
GCA-210ENST00000487445 FAM83BQ5T0W9 1011 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 KRT40Q6A162 431 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.28
GCA-210ENST00000487445 ARMC9Q7Z3E5 817 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 ADGRF4Q8IZF3 695 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 PIGSQ96S52 555 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 VPS54Q9P1Q0 977 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 RBM27Q9P2N5 1060 aaKnown RBP16.77■□□□□ 0.28
GCA-210ENST00000487445 SEC63Q9UGP8 760 aaKnown RBP16.77■□□□□ 0.28
GCA-210ENST00000487445 SNCAIPQ9Y6H5 919 aa16.77■□□□□ 0.28
GCA-210ENST00000487445 SCG2P13521 617 aa16.77■□□□□ 0.27
GCA-210ENST00000487445 XBP1P17861 261 aa16.77■□□□□ 0.27
GCA-210ENST00000487445 SMARCA1P28370 1054 aa16.77■□□□□ 0.27
GCA-210ENST00000487445 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.27
GCA-210ENST00000487445 ANKRD13AQ8IZ07 590 aa16.77■□□□□ 0.27
GCA-210ENST00000487445 GPKOWQ92917 476 aaPredicted RBP eCLIP16.77■□□□□ 0.27
GCA-210ENST00000487445 KIAA1683Q9H0B3 1180 aa16.77■□□□□ 0.27
GCA-210ENST00000487445 RIOX1Q9H6W3 641 aa16.77■□□□□ 0.27
GCA-210ENST00000487445 ELP3Q9H9T3 547 aa16.77■□□□□ 0.27
GCA-210ENST00000487445 KCNJ14Q9UNX9 436 aa16.77■□□□□ 0.27
GCA-210ENST00000487445 HEATR3Q7Z4Q2 680 aa16.76■□□□□ 0.27
GCA-210ENST00000487445 CHAMP1Q96JM3 812 aa16.76■□□□□ 0.27
GCA-210ENST00000487445 CLMNQ96JQ2 1002 aa16.76■□□□□ 0.27
GCA-210ENST00000487445 WDR18Q9BV38 432 aa16.76■□□□□ 0.27
GCA-210ENST00000487445 JMJD4Q9H9V9 463 aa16.76■□□□□ 0.27
GCA-210ENST00000487445 GPBP1L1Q9HC44 474 aaPredicted RBP16.76■□□□□ 0.27
GCA-210ENST00000487445 MYH8P13535 1937 aa16.76■□□□□ 0.27
GCA-210ENST00000487445 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
GCA-210ENST00000487445 USP14P54578 494 aa16.75■□□□□ 0.27
GCA-210ENST00000487445 BACE1P56817 501 aa16.75■□□□□ 0.27
GCA-210ENST00000487445 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
GCA-210ENST00000487445 STAT2P52630 851 aa16.75■□□□□ 0.27
GCA-210ENST00000487445 GNL2Q13823 731 aaKnown RBP16.75■□□□□ 0.27
GCA-210ENST00000487445 CELF2O95319 508 aaKnown RBP16.74■□□□□ 0.27
GCA-210ENST00000487445 HMGCS2P54868 508 aa16.74■□□□□ 0.27
GCA-210ENST00000487445 SNAP25P60880 206 aa16.74■□□□□ 0.27
GCA-210ENST00000487445 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
GCA-210ENST00000487445 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
GCA-210ENST00000487445 FAM173BQ6P4H8 233 aa16.74■□□□□ 0.27
GCA-210ENST00000487445 LPAR1Q92633 364 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms