RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 IL17RBQ9NRM6 502 aa29.66■■■□□ 2.34
HLA-C-208ENST00000487245 SPDYE4A6NLX3 237 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 HSPA1LP34931 641 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 NR1I3Q14994 352 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 KMT5BQ4FZB7 885 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 SEPT12Q8IYM1 358 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 GRAMD1CQ8IYS0 662 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 A0A1B0GTH6 734 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 UFL1O94874 794 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 SERPINB2P05120 415 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 GYS1P13807 737 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 HMGB2P26583 209 aaKnown RBP29.65■■■□□ 2.34
HLA-C-208ENST00000487245 ELF2Q15723 593 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 SLC27A3Q5K4L6 730 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 TGFBRAP1Q8WUH2 860 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 DHX58Q96C10 678 aa29.65■■■□□ 2.34
HLA-C-208ENST00000487245 TRPC5Q9UL62 973 aaPredicted RBP29.65■■■□□ 2.34
HLA-C-208ENST00000487245 NAV1Q8NEY1 1877 aa29.64■■■□□ 2.34
HLA-C-208ENST00000487245 TSPY3P0CV98 308 aa29.64■■■□□ 2.34
HLA-C-208ENST00000487245 TSPY8P0CW00 308 aa29.64■■■□□ 2.34
HLA-C-208ENST00000487245 DIXDC1Q155Q3 683 aa29.64■■■□□ 2.34
HLA-C-208ENST00000487245 TC2NQ8N9U0 490 aa29.64■■■□□ 2.34
HLA-C-208ENST00000487245 SYMPKQ92797 1274 aaKnown RBP29.64■■■□□ 2.34
HLA-C-208ENST00000487245 PAGE5Q96GU1 130 aa29.64■■■□□ 2.34
HLA-C-208ENST00000487245 GSDMAQ96QA5 445 aa29.64■■■□□ 2.34
HLA-C-208ENST00000487245 BAG1Q99933 345 aaPredicted RBP29.64■■■□□ 2.34
HLA-C-208ENST00000487245 LZTS2Q9BRK4 669 aa29.64■■■□□ 2.34
HLA-C-208ENST00000487245 RTFDC1Q9BY42 306 aaPredicted RBP29.64■■■□□ 2.34
HLA-C-208ENST00000487245 UBR3Q6ZT12 1888 aa29.64■■■□□ 2.33
HLA-C-208ENST00000487245 AFF2P51816 1311 aa29.64■■■□□ 2.33
HLA-C-208ENST00000487245 A0A087X0B3 334 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 PTGDRQ13258 359 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 ZNF827Q17R98 1081 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 SPATA1Q5VX52 437 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 GALNT17Q6IS24 598 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 DYNLL2Q96FJ2 89 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 EPSTI1Q96J88 318 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 FAM53CQ9NYF3 392 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 PODXL2Q9NZ53 605 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 PPP2R2CQ9Y2T4 447 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 GPR75-ASB3A0A0A6YYF3 556 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 CUL4BQ13620 913 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 BLIDQ8IZY5 108 aa29.63■■■□□ 2.33
HLA-C-208ENST00000487245 FAM163AQ96GL9 167 aaPredicted RBP29.63■■■□□ 2.33
HLA-C-208ENST00000487245 HOXA10P31260 410 aaPredicted RBP29.62■■■□□ 2.33
HLA-C-208ENST00000487245 DPYDQ12882 1025 aa29.62■■■□□ 2.33
HLA-C-208ENST00000487245 ARL6IP4Q66PJ3 421 aaKnown RBP29.62■■■□□ 2.33
HLA-C-208ENST00000487245 PIK3AP1Q6ZUJ8 805 aa29.62■■■□□ 2.33
HLA-C-208ENST00000487245 TBC1D22AQ8WUA7 517 aa29.62■■■□□ 2.33
HLA-C-208ENST00000487245 GRIK5Q16478 980 aa29.61■■■□□ 2.33
HLA-C-208ENST00000487245 FBXO38Q6PIJ6 1188 aa29.61■■■□□ 2.33
HLA-C-208ENST00000487245 TMC4Q7Z404 712 aa29.61■■■□□ 2.33
HLA-C-208ENST00000487245 TRMT44Q8IYL2 757 aaKnown RBP29.61■■■□□ 2.33
HLA-C-208ENST00000487245 DNAI1Q9UI46 699 aa29.61■■■□□ 2.33
HLA-C-208ENST00000487245 PCDHA4Q9UN74 947 aa29.61■■■□□ 2.33
HLA-C-208ENST00000487245 VWA3AA6NCI4 1184 aa29.61■■■□□ 2.33
HLA-C-208ENST00000487245 H2AFXP16104 143 aaPredicted RBP29.61■■■□□ 2.33
HLA-C-208ENST00000487245 APTXQ7Z2E3 356 aaKnown RBP29.61■■■□□ 2.33
HLA-C-208ENST00000487245 CRAMP1Q96RY5 1269 aa29.61■■■□□ 2.33
HLA-C-208ENST00000487245 SAMSN1Q9NSI8 373 aaKnown RBP29.61■■■□□ 2.33
HLA-C-208ENST00000487245 PRDM4Q9UKN5 801 aa29.61■■■□□ 2.33
HLA-C-208ENST00000487245 BTDP43251 543 aa29.6■■■□□ 2.33
HLA-C-208ENST00000487245 CCDC148Q8NFR7 591 aa29.6■■■□□ 2.33
HLA-C-208ENST00000487245 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.6■■■□□ 2.333e-12■■□□□ 11.4
HLA-C-208ENST00000487245 MAD2L2Q9UI95 211 aa29.6■■■□□ 2.33
HLA-C-208ENST00000487245 V9GYY5 206 aaPredicted RBP29.6■■■□□ 2.33
HLA-C-208ENST00000487245 WNT7AO00755 349 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 CDKAL1Q5VV42 579 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 IQUBQ8NA54 791 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 RASA1P20936 1047 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 GOLGA8FQ08AF8 430 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 GOLGA8DPQ0D2H9 430 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 NOM1Q5C9Z4 860 aaKnown RBP29.59■■■□□ 2.33
HLA-C-208ENST00000487245 MAPKAPK5Q8IW41 473 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 DAGLBQ8NCG7 672 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 PANX2Q96RD6 677 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 PRDM10Q9NQV6 1147 aa29.59■■■□□ 2.33
HLA-C-208ENST00000487245 SYNRGQ9UMZ2 1314 aa29.58■■■□□ 2.33
HLA-C-208ENST00000487245 SLC4A8Q2Y0W8 1093 aa29.58■■■□□ 2.33
HLA-C-208ENST00000487245 C16orf86Q6ZW13 317 aa29.58■■■□□ 2.33
HLA-C-208ENST00000487245 TEX11Q8IYF3 940 aa29.58■■■□□ 2.33
HLA-C-208ENST00000487245 GPR101Q96P66 508 aaPredicted RBP29.58■■■□□ 2.33
HLA-C-208ENST00000487245 USP17L3A6NCW0 530 aa29.57■■■□□ 2.32
HLA-C-208ENST00000487245 USP17L4A6NCW7 530 aa29.57■■■□□ 2.32
HLA-C-208ENST00000487245 LONP1P36776 959 aaKnown RBP29.57■■■□□ 2.32
HLA-C-208ENST00000487245 PBX1P40424 430 aa29.57■■■□□ 2.32
HLA-C-208ENST00000487245 USP17L1Q7RTZ2 530 aa29.57■■■□□ 2.32
HLA-C-208ENST00000487245 CTAGE1Q96RT6 745 aa29.57■■■□□ 2.32
HLA-C-208ENST00000487245 PALM3A6NDB9 673 aaPredicted RBP29.57■■■□□ 2.32
HLA-C-208ENST00000487245 E2F4Q16254 413 aa29.57■■■□□ 2.32
HLA-C-208ENST00000487245 STAG2Q8N3U4 1231 aa29.57■■■□□ 2.32
HLA-C-208ENST00000487245 TMEM47Q9BQJ4 181 aa29.57■■■□□ 2.32
HLA-C-208ENST00000487245 PPP1R3GB7ZBB8 358 aa29.56■■■□□ 2.32
HLA-C-208ENST00000487245 CD44P16070 742 aaKnown RBP29.56■■■□□ 2.32
HLA-C-208ENST00000487245 AFMP43652 599 aa29.56■■■□□ 2.32
HLA-C-208ENST00000487245 GABPB1Q06547 395 aaPredicted RBP29.56■■■□□ 2.32
HLA-C-208ENST00000487245 KLRG2A4D1S0 409 aaPredicted RBP29.55■■■□□ 2.32
HLA-C-208ENST00000487245 MCM7P33993 719 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 CDK8P49336 464 aa29.55■■■□□ 2.32
HLA-C-208ENST00000487245 ERCC6LQ2NKX8 1250 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms