RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 THAP5Q7Z6K1 395 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 VPS37DQ86XT2 251 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 C1QL4Q86Z23 238 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 CELF2-AS1Q8N7Q2 184 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 C19orf47Q8N9M1 422 aaKnown RBP3.65□□□□□ -1.83
ITGB1-213ENST00000484088 CYB5D2Q8WUJ1 264 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 HNRNPLLQ8WVV9 542 aaKnown RBP3.65□□□□□ -1.83
ITGB1-213ENST00000484088 SHISA4Q96DD7 197 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 SLC9A7Q96T83 725 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 GPR62Q9BZJ7 368 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 LNPKQ9C0E8 428 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 ADAMTS10Q9H324 1103 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 PIF1Q9H611 641 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 PICK1Q9NRD5 415 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 USP35Q9P2H5 1018 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 TPX2Q9ULW0 747 aaKnown RBP3.65□□□□□ -1.83
ITGB1-213ENST00000484088 MSRB2Q9Y3D2 182 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 IMPDH2P12268 514 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 PLCG1P19174 1290 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 MCM4P33991 863 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 TRHRP34981 398 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-213ENST00000484088 SNW1Q13573 536 aaKnown RBP3.64□□□□□ -1.83
ITGB1-213ENST00000484088 SPOCD1Q6ZMY3 1216 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 ANKS3Q6ZW76 656 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 DPH6Q7L8W6 267 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 NLRC3Q7RTR2 1065 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 KLHL6Q8WZ60 621 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 ANAPC16Q96DE5 110 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 ZSWIM5Q9P217 1185 aa3.64□□□□□ -1.83
ITGB1-213ENST00000484088 GNAT3A8MTJ3 354 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 ZGLP1P0C6A0 271 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 GUCY2CP25092 1073 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 GDNFP39905 211 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 KIR3DL1P43629 444 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 RAB33AQ14088 237 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 RASA3Q14644 834 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 ARSHQ5FYA8 562 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 INTS3Q68E01 1043 aaKnown RBP3.63□□□□□ -1.83
ITGB1-213ENST00000484088 MRM1Q6IN84 353 aaKnown RBP3.63□□□□□ -1.83
ITGB1-213ENST00000484088 PRR23BQ6ZRT6 265 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 TTC6Q86TZ1 520 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 TSPYL5Q86VY4 417 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-213ENST00000484088 PPFIBP1Q86W92 1011 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 ZSWIM9Q86XI8 627 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 TMEM192Q8IY95 271 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 FAM13CQ8NE31 585 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 OR6P1Q8NGX9 317 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 KREMEN1Q96MU8 473 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 FERD3LQ96RJ6 166 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 KIF2CQ99661 725 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 TM9SF2Q99805 663 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 MINPP1Q9UNW1 487 aa3.63□□□□□ -1.83
ITGB1-213ENST00000484088 TMEM82A0PJX8 343 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 B2RBV5 119 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 RGS13O14921 159 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 SHOXO15266 292 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 STK10O94804 968 aaKnown RBP3.62□□□□□ -1.83
ITGB1-213ENST00000484088 HPXP02790 462 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 SSBP05455 408 aaKnown RBP eCLIP3.62□□□□□ -1.83
ITGB1-213ENST00000484088 TEKQ02763 1124 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 PDE4BQ07343 736 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 FZD5Q13467 585 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 CCDC144BQ3MJ40 725 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 NBPF6Q5VWK0 638 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 UNC5AQ6ZN44 842 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 ZNF513Q8N8E2 541 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-213ENST00000484088 PIWIL2Q8TC59 973 aaKnown RBP3.62□□□□□ -1.83
ITGB1-213ENST00000484088 RNF141Q8WVD5 230 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 NBPF4Q96M43 638 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 ALPK1Q96QP1 1244 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 PPP1R1BQ9UD71 204 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-213ENST00000484088 SUSD2Q9UGT4 822 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 KLHL3Q9UH77 587 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 PCDHA11Q9Y5I1 949 aa3.62□□□□□ -1.83
ITGB1-213ENST00000484088 FAM221BA6H8Z2 402 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 FAM155AB1AL88 458 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-213ENST00000484088 CAPNS1P04632 268 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 YBX3P16989 372 aaKnown RBP eCLIP3.61□□□□□ -1.831e-17■■□□□ 12.4
ITGB1-213ENST00000484088 TPP2P29144 1249 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-213ENST00000484088 HNRNPUQ00839 825 aaKnown RBP eCLIP3.61□□□□□ -1.83
ITGB1-213ENST00000484088 DDR2Q16832 855 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 LRRFIP1Q32MZ4 808 aaKnown RBP3.61□□□□□ -1.83
ITGB1-213ENST00000484088 FBXW10Q5XX13 1052 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 GIMAP6Q6P9H5 292 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 ARHGAP27Q6ZUM4 889 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 TMC3Q7Z5M5 1100 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 USHBP1Q8N6Y0 703 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 LINC01599Q8WXQ3 324 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 HIRIP3Q9BW71 556 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-213ENST00000484088 HDAC8Q9BY41 377 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 OSBPL2Q9H1P3 480 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 C19orf44Q9H6X5 657 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 SLAMF8Q9P0V8 285 aa3.61□□□□□ -1.83
ITGB1-213ENST00000484088 ZNF214Q9UL59 606 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-213ENST00000484088 ADAMTS20P59510 1910 aa3.6□□□□□ -1.83
ITGB1-213ENST00000484088 C9IYK1 514 aa3.6□□□□□ -1.83
ITGB1-213ENST00000484088 GJB6O95452 261 aa3.6□□□□□ -1.83
ITGB1-213ENST00000484088 GLI1P08151 1106 aa3.6□□□□□ -1.83
ITGB1-213ENST00000484088 CTSKP43235 329 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms