RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 TSHZ3Q63HK5 1081 aa23.32■■□□□ 1.32
R3HDM1-215ENST00000483021 PLXNA1Q9UIW2 1896 aa23.32■■□□□ 1.32
R3HDM1-215ENST00000483021 ERC2O15083 957 aa23.31■■□□□ 1.32
R3HDM1-215ENST00000483021 GPAA1O43292 621 aa23.31■■□□□ 1.32
R3HDM1-215ENST00000483021 FCER1AP12319 257 aa23.31■■□□□ 1.32
R3HDM1-215ENST00000483021 MKNK2Q9HBH9 465 aa23.31■■□□□ 1.32
R3HDM1-215ENST00000483021 ZNF287Q9HBT7 754 aa23.31■■□□□ 1.32
R3HDM1-215ENST00000483021 ADAMTS5Q9UNA0 930 aa23.31■■□□□ 1.32
R3HDM1-215ENST00000483021 DNM1LO00429 736 aa23.3■■□□□ 1.32
R3HDM1-215ENST00000483021 RASA1P20936 1047 aa23.3■■□□□ 1.32
R3HDM1-215ENST00000483021 COPB2P35606 906 aa23.3■■□□□ 1.32
R3HDM1-215ENST00000483021 TMEM132BQ14DG7 1078 aa23.3■■□□□ 1.32
R3HDM1-215ENST00000483021 SAMD1Q6SPF0 538 aaPredicted RBP23.3■■□□□ 1.32
R3HDM1-215ENST00000483021 PPP1R9AQ9ULJ8 1098 aa23.3■■□□□ 1.32
R3HDM1-215ENST00000483021 MINDY4BA8MYZ0 360 aa23.29■■□□□ 1.32
R3HDM1-215ENST00000483021 RAD21O60216 631 aa23.29■■□□□ 1.32
R3HDM1-215ENST00000483021 COBLO75128 1261 aa23.29■■□□□ 1.32
R3HDM1-215ENST00000483021 SYN1P17600 705 aa23.29■■□□□ 1.32
R3HDM1-215ENST00000483021 TDO2P48775 406 aa23.29■■□□□ 1.32
R3HDM1-215ENST00000483021 LRRC26Q2I0M4 334 aa23.29■■□□□ 1.32
R3HDM1-215ENST00000483021 TRPV1Q8NER1 839 aa23.29■■□□□ 1.32
R3HDM1-215ENST00000483021 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.29■■□□□ 1.32
R3HDM1-215ENST00000483021 FAM83BQ5T0W9 1011 aa23.28■■□□□ 1.32
R3HDM1-215ENST00000483021 RIOX2Q8IUF8 465 aa23.28■■□□□ 1.32
R3HDM1-215ENST00000483021 EPB41L4AQ9HCS5 686 aaPredicted RBP23.28■■□□□ 1.32
R3HDM1-215ENST00000483021 FBXO28Q9NVF7 368 aa23.28■■□□□ 1.32
R3HDM1-215ENST00000483021 NYAP2Q9P242 653 aa23.28■■□□□ 1.32
R3HDM1-215ENST00000483021 M0R2C6 588 aa23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 VWA5AO00534 786 aa23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 SEPT4O43236 478 aa23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 APPP05067 770 aa23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 MAGEA10P43363 369 aaPredicted RBP23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 ARRDC4Q8NCT1 418 aa23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 MAML3Q96JK9 1138 aa23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 SENP6Q9GZR1 1112 aaPredicted RBP23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 PCDHB15Q9Y5E8 787 aa23.27■■□□□ 1.32
R3HDM1-215ENST00000483021 STAT3P40763 770 aa23.26■■□□□ 1.31
R3HDM1-215ENST00000483021 KCTD2Q14681 263 aa23.26■■□□□ 1.31
R3HDM1-215ENST00000483021 STK11IPQ8N1F8 1099 aa23.26■■□□□ 1.31
R3HDM1-215ENST00000483021 PI4K2BQ8TCG2 481 aa23.26■■□□□ 1.31
R3HDM1-215ENST00000483021 MMP19Q99542 508 aa23.26■■□□□ 1.31
R3HDM1-215ENST00000483021 SLF1Q9BQI6 1058 aa23.26■■□□□ 1.31
R3HDM1-215ENST00000483021 NACAP1Q9BZK3 213 aa23.26■■□□□ 1.31
R3HDM1-215ENST00000483021 ZNF214Q9UL59 606 aaPredicted RBP23.26■■□□□ 1.31
R3HDM1-215ENST00000483021 PATL2C9JE40 543 aaKnown RBP23.25■■□□□ 1.31
R3HDM1-215ENST00000483021 ZNF444Q8N0Y2 327 aaPredicted RBP23.25■■□□□ 1.31
R3HDM1-215ENST00000483021 FSD1Q9BTV5 496 aa23.25■■□□□ 1.31
R3HDM1-215ENST00000483021 NRBP1Q9UHY1 535 aa23.25■■□□□ 1.31
R3HDM1-215ENST00000483021 SYNPO2Q9UMS6 1093 aa23.25■■□□□ 1.31
R3HDM1-215ENST00000483021 KBTBD13C9JR72 458 aa23.24■■□□□ 1.31
R3HDM1-215ENST00000483021 F5H6K3 240 aa23.24■■□□□ 1.31
R3HDM1-215ENST00000483021 RRP1P56182 461 aaKnown RBP23.24■■□□□ 1.31
R3HDM1-215ENST00000483021 KLRC3Q07444 240 aa23.24■■□□□ 1.31
R3HDM1-215ENST00000483021 IFNL3Q8IZI9 196 aa23.24■■□□□ 1.31
R3HDM1-215ENST00000483021 TDHQ8IZJ6 230 aa23.24■■□□□ 1.31
R3HDM1-215ENST00000483021 REPS2Q8NFH8 660 aa23.24■■□□□ 1.31
R3HDM1-215ENST00000483021 DIS3Q9Y2L1 958 aaKnown RBP23.24■■□□□ 1.31
R3HDM1-215ENST00000483021 IGKV6D-41A0A0C4DH26 115 aa23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 SOX1O00570 391 aaPredicted RBP23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 NDUFB10O96000 172 aa23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 SLC3A2P08195 630 aaKnown RBP23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 MX1P20591 662 aa23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 TEX13BQ9BXU2 312 aa23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 UBE2OQ9C0C9 1292 aaKnown RBP23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 ZBTB47Q9UFB7 747 aaPredicted RBP23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 PLIN4Q96Q06 1357 aa23.23■■□□□ 1.31
R3HDM1-215ENST00000483021 PDE4BQ07343 736 aa23.22■■□□□ 1.31
R3HDM1-215ENST00000483021 GPR153Q6NV75 609 aa23.22■■□□□ 1.31
R3HDM1-215ENST00000483021 PRPF38AQ8NAV1 312 aaKnown RBP23.22■■□□□ 1.31
R3HDM1-215ENST00000483021 NUP88Q99567 741 aaPredicted RBP23.22■■□□□ 1.31
R3HDM1-215ENST00000483021 NAPBQ9H115 298 aa23.22■■□□□ 1.31
R3HDM1-215ENST00000483021 CLIP2Q9UDT6 1046 aa23.22■■□□□ 1.31
R3HDM1-215ENST00000483021 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 TTLL1O95922 423 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 LRIT3Q3SXY7 679 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 ZMYM1Q5SVZ6 1142 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 GJC2Q5T442 439 aaPredicted RBP23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 OTUD7AQ8TE49 926 aaPredicted RBP23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 MKL1Q969V6 931 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 CEP95Q96GE4 821 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 LRCH3Q96II8 777 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 TINF2Q9BSI4 451 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 MTMR4Q9NYA4 1195 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 LTBP2Q14767 1821 aa23.21■■□□□ 1.31
R3HDM1-215ENST00000483021 PRDM1O75626 825 aa23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 PGK2P07205 417 aa23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 ATN1P54259 1190 aaPredicted RBP23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 ZNF792Q3KQV3 632 aa23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 PRAMEF19Q5SWL8 479 aa23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 ANO1Q5XXA6 986 aa23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 SEC62Q99442 399 aaKnown RBP23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 PRKAG2Q9UGJ0 569 aa23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 CTDP1Q9Y5B0 961 aaPredicted RBP23.2■■□□□ 1.3
R3HDM1-215ENST00000483021 ATP2A1O14983 1001 aa23.19■■□□□ 1.3
R3HDM1-215ENST00000483021 TSPY3P0CV98 308 aa23.19■■□□□ 1.3
R3HDM1-215ENST00000483021 TSPY8P0CW00 308 aa23.19■■□□□ 1.3
R3HDM1-215ENST00000483021 SNRNP48Q6IEG0 339 aaKnown RBP23.19■■□□□ 1.3
R3HDM1-215ENST00000483021 GMCL1P1Q8NEA9 526 aa23.19■■□□□ 1.3
R3HDM1-215ENST00000483021 LBHD1Q9BQE6 289 aaPredicted RBP23.19■■□□□ 1.3
R3HDM1-215ENST00000483021 SALL3Q9BXA9 1300 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms