RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 RCOR1Q9UKL0 485 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 PCDHA5Q9Y5H7 936 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 CERKLQ49MI3 558 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 CEP112Q8N8E3 955 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 ARHGEF10LQ9HCE6 1279 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 PXDNLA1KZ92 1463 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 DDX39AO00148 427 aaKnown RBP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 FMNL1O95466 1100 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 PLCD1P51178 756 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 TXNRD1Q16881 649 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 MB21D2Q8IYB1 491 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-218ENST00000482171 TAF4BQ92750 862 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 KIFC2Q96AC6 838 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
SMPD4-218ENST00000482171 FAM196BA6NMK8 535 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 GDF11O95390 407 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 CALRP27797 417 aaKnown RBP12.66□□□□□ -0.38
SMPD4-218ENST00000482171 CDC27P30260 824 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 TECP42680 631 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 LIFRP42702 1097 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 PAFAH1B1P43034 410 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 CNKSR1Q969H4 720 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 FERMT2Q96AC1 680 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 TRAF5O00463 557 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 USO1O60763 962 aaKnown RBP12.66□□□□□ -0.38
SMPD4-218ENST00000482171 WDHD1O75717 1129 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-218ENST00000482171 NOP2P46087 812 aaKnown RBP12.66□□□□□ -0.38
SMPD4-218ENST00000482171 CALCRLQ16602 461 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 NCAPH2Q6IBW4 605 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 MAEAQ7L5Y9 396 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 PLA2G12BQ9BX93 195 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-218ENST00000482171 CD209Q9NNX6 404 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 TAB2Q9NYJ8 693 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-218ENST00000482171 TRAF1Q13077 416 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 DPCR1Q3MIW9 517 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 KCTD1Q719H9 257 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 CABP7Q86V35 215 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 CSRNP2Q9H175 543 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 RABEP2Q9H5N1 569 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 BCCIPQ9P287 314 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMPD4-218ENST00000482171 SPATA31A5Q5VU36 1347 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 SPATA31A7Q8IWB4 1347 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 SYNRGQ9UMZ2 1314 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 JCADQ9P266 1359 aa12.66□□□□□ -0.38
SMPD4-218ENST00000482171 DDAH1O94760 285 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 ICA1Q05084 483 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 VPS72Q15906 364 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 NSMFQ6X4W1 530 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 C11orf57Q6ZUT1 292 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-218ENST00000482171 HDXQ7Z353 690 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 NBPF11Q86T75 865 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 IGSF22Q8N9C0 903 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 MLKLQ8NB16 471 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 CAPZA3Q96KX2 299 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 SERPINB13Q9UIV8 391 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 PCDHB6Q9Y5E3 794 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
SMPD4-218ENST00000482171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMPD4-218ENST00000482171 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 NTSR2O95665 410 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-218ENST00000482171 CSGALNACT2Q8N6G5 542 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 DCP1AQ9NPI6 582 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-218ENST00000482171 GUCA1BQ9UMX6 200 aa12.65□□□□□ -0.38
SMPD4-218ENST00000482171 EBAG9O00559 213 aa12.65□□□□□ -0.39
SMPD4-218ENST00000482171 ATP2C2O75185 946 aa12.65□□□□□ -0.39
SMPD4-218ENST00000482171 FAM13AO94988 1023 aa12.65□□□□□ -0.39
SMPD4-218ENST00000482171 ARID5BQ14865 1188 aa12.65□□□□□ -0.39
SMPD4-218ENST00000482171 LZTS2Q9BRK4 669 aa12.65□□□□□ -0.39
SMPD4-218ENST00000482171 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.39
SMPD4-218ENST00000482171 ETF1P62495 437 aaKnown RBP12.64□□□□□ -0.39
SMPD4-218ENST00000482171 TBC1D8BQ0IIM8 1120 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 INTS5Q6P9B9 1019 aaKnown RBP12.64□□□□□ -0.39
SMPD4-218ENST00000482171 VPS36Q86VN1 386 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 COA7Q96BR5 231 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 BICD1Q96G01 975 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 POLR3EQ9NVU0 708 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 FANCLQ9NW38 375 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 IFT172Q9UG01 1749 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 C21orf2O43822 256 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 MMP1P03956 469 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMPD4-218ENST00000482171 FBXO38Q6PIJ6 1188 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-218ENST00000482171 NELFCDQ8IXH7 590 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 SMYD4Q8IYR2 804 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-218ENST00000482171 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 SALL3Q9BXA9 1300 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 TMCO5BA8MYB1 307 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 PAK1Q13153 545 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 GRM1Q13255 1194 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 SLFN13Q68D06 897 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 MRFAP1L1Q96HT8 127 aa12.64□□□□□ -0.39
SMPD4-218ENST00000482171 LUC7L2Q9Y383 392 aaKnown RBP12.64□□□□□ -0.39
SMPD4-218ENST00000482171 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms