RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KIAA1211Q6ZU35 1233 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 Q7L0L9 218 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 PLEKHH3Q7Z736 793 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 SOCS4Q8WXH5 440 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 BTBD7Q9P203 1132 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 SERPINB13Q9UIV8 391 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 CDH23Q9H251 3354 aa10.76□□□□□ -0.69
VCP-206ENST00000480327 PRUNE2Q8WUY3 3088 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 ZKSCAN1P17029 563 aaPredicted RBP10.75□□□□□ -0.69
VCP-206ENST00000480327 PPARAQ07869 468 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 SBK1Q52WX2 424 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 CATSPERGQ6ZRH7 1159 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 TRPV1Q8NER1 839 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 APBA2Q99767 749 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 DSCC1Q9BVC3 393 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 EHD4Q9H223 541 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 ANO2Q9NQ90 1003 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 INCENPQ9NQS7 918 aa10.75□□□□□ -0.69
VCP-206ENST00000480327 GREB1LQ9C091 1923 aaPredicted RBP10.74□□□□□ -0.69
VCP-206ENST00000480327 A0A1W2PRG0 241 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 MPHOSPH10O00566 681 aaKnown RBP10.74□□□□□ -0.69
VCP-206ENST00000480327 PRDM1O75626 825 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 VCAM1P19320 739 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 RGS2P41220 211 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 CDK8P49336 464 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 GABPAQ06546 454 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 MAP2K5Q13163 448 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 ALX1Q15699 326 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 KIAA1755Q5JYT7 1200 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 LBX2Q6XYB7 198 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 NPLOC4Q8TAT6 608 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 LSG1Q9H089 658 aaKnown RBP10.74□□□□□ -0.69
VCP-206ENST00000480327 KIAA1683Q9H0B3 1180 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 RABGAP1Q9Y3P9 1069 aa10.74□□□□□ -0.69
VCP-206ENST00000480327 VCANP13611 3396 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 SPDYE16A6NNV3 312 aaPredicted RBP10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L15C9J2P7 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L13C9JLJ4 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L11C9JVI0 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L18D6R9N7 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L22D6RA61 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L17D6RBQ6 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L19D6RCP7 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L20D6RJB6 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 PTPREP23469 700 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 USP17L24Q0WX57 530 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 GRB14Q14449 540 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 CERKLQ49MI3 558 aaPredicted RBP10.73□□□□□ -0.69
VCP-206ENST00000480327 GPR153Q6NV75 609 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 C16orf86Q6ZW13 317 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 TRMT44Q8IYL2 757 aaKnown RBP10.73□□□□□ -0.69
VCP-206ENST00000480327 TDHQ8IZJ6 230 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 DEFB123Q8N688 67 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 SLC17A8Q8NDX2 589 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 GTF3C2Q8WUA4 911 aaPredicted RBP10.73□□□□□ -0.69
VCP-206ENST00000480327 MKNK2Q9HBH9 465 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 TOMM22Q9NS69 142 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 SWAP70Q9UH65 585 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 TACC3Q9Y6A5 838 aa10.73□□□□□ -0.69
VCP-206ENST00000480327 SPTBN5Q9NRC6 3674 aaKnown RBP10.72□□□□□ -0.69
VCP-206ENST00000480327 SLC15A5A6NIM6 579 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 DLL1O00548 723 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 ZNF213O14771 459 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 SLC3A2P08195 630 aaKnown RBP10.72□□□□□ -0.69
VCP-206ENST00000480327 HOXC6P09630 235 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 AKR1B1P15121 316 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 SEPT2Q15019 361 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 RAB3GAP1Q15042 981 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 ABCB5Q2M3G0 1257 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 RRP12Q5JTH9 1297 aaKnown RBP10.72□□□□□ -0.69
VCP-206ENST00000480327 SIAH1Q8IUQ4 282 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 TBC1D10CQ8IV04 446 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 RPAP3Q9H6T3 665 aaPredicted RBP10.72□□□□□ -0.69
VCP-206ENST00000480327 MTMR10Q9NXD2 777 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 CTNNA3Q9UI47 895 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 RBM8AQ9Y5S9 174 aaKnown RBP10.72□□□□□ -0.69
VCP-206ENST00000480327 U3KPZ7 1027 aaPredicted RBP10.72□□□□□ -0.69
VCP-206ENST00000480327 ZMYM6O95789 1325 aa10.72□□□□□ -0.69
VCP-206ENST00000480327 RASA1P20936 1047 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 CYP2C19P33261 490 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 USP14P54578 494 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 MDM2Q00987 491 aaPredicted RBP10.71□□□□□ -0.69
VCP-206ENST00000480327 PDE4BQ07343 736 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 LAMA4Q16363 1823 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 IMMTQ16891 758 aaKnown RBP10.71□□□□□ -0.69
VCP-206ENST00000480327 FAM47AQ5JRC9 791 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 CLEC10AQ8IUN9 316 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 ZNF444Q8N0Y2 327 aaPredicted RBP10.71□□□□□ -0.69
VCP-206ENST00000480327 MAP4K1Q92918 833 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 ROBO3Q96MS0 1386 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 FEZ1Q99689 392 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 UBE2OQ9C0C9 1292 aaKnown RBP10.71□□□□□ -0.69
VCP-206ENST00000480327 CABP5Q9NP86 173 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 ANAPC4Q9UJX5 808 aa10.71□□□□□ -0.69
VCP-206ENST00000480327 MCM3APO60318 1980 aa10.7□□□□□ -0.7
VCP-206ENST00000480327 CYP21A2P08686 494 aa10.7□□□□□ -0.7
VCP-206ENST00000480327 CYBAP13498 195 aa10.7□□□□□ -0.7
VCP-206ENST00000480327 MFSD6Q6ZSS7 791 aa10.7□□□□□ -0.7
VCP-206ENST00000480327 MOV10L1Q9BXT6 1211 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms