RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 HOXC10Q9NYD6 342 aa26.43■■□□□ 1.82
SF1-214ENST00000477596 SLFN13Q68D06 897 aa26.42■■□□□ 1.82
SF1-214ENST00000477596 GMCL1P1Q8NEA9 526 aa26.42■■□□□ 1.82
SF1-214ENST00000477596 RNF41Q9H4P4 317 aaPredicted RBP26.42■■□□□ 1.82
SF1-214ENST00000477596 CTNNA3Q9UI47 895 aa26.42■■□□□ 1.82
SF1-214ENST00000477596 ELNP15502 786 aa26.41■■□□□ 1.82
SF1-214ENST00000477596 NOVP48745 357 aa26.41■■□□□ 1.82
SF1-214ENST00000477596 GPR142Q7Z601 462 aa26.41■■□□□ 1.82
SF1-214ENST00000477596 GJD2Q9UKL4 321 aa26.41■■□□□ 1.82
SF1-214ENST00000477596 PPP1R9AQ9ULJ8 1098 aa26.41■■□□□ 1.82
SF1-214ENST00000477596 SYNPO2Q9UMS6 1093 aa26.41■■□□□ 1.82
SF1-214ENST00000477596 TAF6LQ9Y6J9 622 aa26.41■■□□□ 1.82
SF1-214ENST00000477596 B4E1Z4 1266 aa26.4■■□□□ 1.82
SF1-214ENST00000477596 PCP11498 1178 aaKnown RBP26.4■■□□□ 1.82
SF1-214ENST00000477596 MAPK4P31152 587 aa26.4■■□□□ 1.82
SF1-214ENST00000477596 GRK4P32298 578 aa26.4■■□□□ 1.82
SF1-214ENST00000477596 WDR78Q5VTH9 848 aa26.4■■□□□ 1.82
SF1-214ENST00000477596 ZKSCAN3Q9BRR0 538 aa26.4■■□□□ 1.82
SF1-214ENST00000477596 ESYT1Q9BSJ8 1104 aa26.4■■□□□ 1.82
SF1-214ENST00000477596 MOV10L1Q9BXT6 1211 aaKnown RBP26.4■■□□□ 1.82
SF1-214ENST00000477596 PPP4R2Q9NY27 417 aa26.4■■□□□ 1.82
SF1-214ENST00000477596 MTMR7Q9Y216 660 aa26.4■■□□□ 1.82
SF1-214ENST00000477596 ADCY3O60266 1144 aa26.39■■□□□ 1.82
SF1-214ENST00000477596 KDM4AO75164 1064 aa26.39■■□□□ 1.82
SF1-214ENST00000477596 CCAR1Q8IX12 1150 aaKnown RBP26.39■■□□□ 1.82
SF1-214ENST00000477596 ESR2Q92731 530 aa26.39■■□□□ 1.82
SF1-214ENST00000477596 SLF1Q9BQI6 1058 aa26.39■■□□□ 1.82
SF1-214ENST00000477596 SPATC1LQ9H0A9 340 aa26.39■■□□□ 1.82
SF1-214ENST00000477596 CCNA1P78396 465 aa26.38■■□□□ 1.81
SF1-214ENST00000477596 IRF5Q13568 498 aa26.38■■□□□ 1.81
SF1-214ENST00000477596 PLS1Q14651 629 aa26.38■■□□□ 1.81
SF1-214ENST00000477596 TMEM132BQ14DG7 1078 aa26.38■■□□□ 1.81
SF1-214ENST00000477596 RCSD1Q6JBY9 416 aa26.38■■□□□ 1.81
SF1-214ENST00000477596 PLEKHH3Q7Z736 793 aa26.38■■□□□ 1.81
SF1-214ENST00000477596 TCP11L1Q9NUJ3 509 aa26.38■■□□□ 1.81
SF1-214ENST00000477596 ISY1Q9ULR0 285 aaKnown RBP26.38■■□□□ 1.81
SF1-214ENST00000477596 ADAMTS5Q9UNA0 930 aa26.38■■□□□ 1.81
SF1-214ENST00000477596 VWA5AO00534 786 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 CYP21A2P08686 494 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 BMP3P12645 472 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 MCCP23508 829 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 MTFR1Q15390 333 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 PPP4R3BQ5MIZ7 849 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 MB21D1Q8N884 522 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 SLAIN1Q8ND83 568 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 REPS2Q8NFH8 660 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 TMEM47Q9BQJ4 181 aa26.37■■□□□ 1.81
SF1-214ENST00000477596 CWC22Q9HCG8 908 aaKnown RBP26.37■■□□□ 1.81
SF1-214ENST00000477596 U3KPZ7 1027 aaPredicted RBP26.37■■□□□ 1.81
SF1-214ENST00000477596 POTEFA5A3E0 1075 aa26.36■■□□□ 1.81
SF1-214ENST00000477596 CYP2B6P20813 491 aa26.36■■□□□ 1.81
SF1-214ENST00000477596 MORN1Q5T089 497 aa26.36■■□□□ 1.81
SF1-214ENST00000477596 NBPF11Q86T75 865 aa26.36■■□□□ 1.81
SF1-214ENST00000477596 KIFC2Q96AC6 838 aa26.36■■□□□ 1.81
SF1-214ENST00000477596 GMCL1Q96IK5 515 aa26.36■■□□□ 1.81
SF1-214ENST00000477596 LSG1Q9H089 658 aaKnown RBP26.36■■□□□ 1.81
SF1-214ENST00000477596 RBM8AQ9Y5S9 174 aaKnown RBP26.36■■□□□ 1.81
SF1-214ENST00000477596 BRCA2P51587 3418 aa26.36■■□□□ 1.81
SF1-214ENST00000477596 KIAA0100Q14667 2235 aaKnown RBP26.36■■□□□ 1.81
SF1-214ENST00000477596 RBBP6Q7Z6E9 1792 aaKnown RBP26.35■■□□□ 1.81
SF1-214ENST00000477596 ERCC3P19447 782 aa26.35■■□□□ 1.81
SF1-214ENST00000477596 SLC1A4P43007 532 aa26.35■■□□□ 1.81
SF1-214ENST00000477596 KCTD1Q719H9 257 aa26.35■■□□□ 1.81
SF1-214ENST00000477596 SOCS4Q8WXH5 440 aa26.35■■□□□ 1.81
SF1-214ENST00000477596 USP6NLQ92738 828 aa26.35■■□□□ 1.81
SF1-214ENST00000477596 MAP4K1Q92918 833 aa26.35■■□□□ 1.81
SF1-214ENST00000477596 BIN2Q9UBW5 565 aaPredicted RBP26.35■■□□□ 1.81
SF1-214ENST00000477596 TMEM232C9JQI7 657 aa26.34■■□□□ 1.81
SF1-214ENST00000477596 TOP1P11387 765 aaKnown RBP26.34■■□□□ 1.81
SF1-214ENST00000477596 ERICH6BQ5W0A0 696 aa26.34■■□□□ 1.81
SF1-214ENST00000477596 NUDT12Q9BQG2 462 aa26.34■■□□□ 1.81
SF1-214ENST00000477596 ZNF214Q9UL59 606 aaPredicted RBP26.34■■□□□ 1.81
SF1-214ENST00000477596 CDC45O75419 566 aa26.33■■□□□ 1.81
SF1-214ENST00000477596 INHAP05111 366 aa26.33■■□□□ 1.81
SF1-214ENST00000477596 TRIM32Q13049 653 aa26.33■■□□□ 1.81
SF1-214ENST00000477596 STOX1Q6ZVD7 989 aa26.33■■□□□ 1.81
SF1-214ENST00000477596 PXYLP1Q8TE99 480 aa26.33■■□□□ 1.81
SF1-214ENST00000477596 TRIB2Q92519 343 aa26.33■■□□□ 1.81
SF1-214ENST00000477596 ZSWIM5Q9P217 1185 aa26.33■■□□□ 1.81
SF1-214ENST00000477596 FEM1BQ9UK73 627 aa26.33■■□□□ 1.81
SF1-214ENST00000477596 PTPREP23469 700 aa26.32■■□□□ 1.8
SF1-214ENST00000477596 CCDC96Q2M329 555 aa26.32■■□□□ 1.8
SF1-214ENST00000477596 CYB5R4Q7L1T6 521 aa26.32■■□□□ 1.8
SF1-214ENST00000477596 NCAPG2Q86XI2 1143 aa26.32■■□□□ 1.8
SF1-214ENST00000477596 PRPF38AQ8NAV1 312 aaKnown RBP26.32■■□□□ 1.8
SF1-214ENST00000477596 SHCBP1Q8NEM2 672 aa26.32■■□□□ 1.8
SF1-214ENST00000477596 KRT23Q9C075 422 aa26.32■■□□□ 1.8
SF1-214ENST00000477596 ANO2Q9NQ90 1003 aa26.32■■□□□ 1.8
SF1-214ENST00000477596 ZNF236Q9UL36 1845 aa26.32■■□□□ 1.8
SF1-214ENST00000477596 GRB14Q14449 540 aa26.31■■□□□ 1.8
SF1-214ENST00000477596 CCL14Q16627 93 aa26.31■■□□□ 1.8
SF1-214ENST00000477596 KIAA1211Q6ZU35 1233 aa26.31■■□□□ 1.8
SF1-214ENST00000477596 CNNM2Q9H8M5 875 aa26.31■■□□□ 1.8
SF1-214ENST00000477596 IVNS1ABPQ9Y6Y0 642 aa26.31■■□□□ 1.8
SF1-214ENST00000477596 FRMPD2Q68DX3 1309 aaPredicted RBP26.31■■□□□ 1.8
SF1-214ENST00000477596 SLC15A5A6NIM6 579 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 RGS2P41220 211 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 STAT2P52630 851 aa26.3■■□□□ 1.8
SF1-214ENST00000477596 IKQ13123 557 aaPredicted RBP26.3■■□□□ 1.8
SF1-214ENST00000477596 MAP2K5Q13163 448 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms