RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ALX1Q15699 326 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 RRP12Q5JTH9 1297 aaKnown RBP9.82□□□□□ -0.84
HDAC6-221ENST00000477561 TTC22Q5TAA0 569 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 LBX2Q6XYB7 198 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 LRRC47Q8N1G4 583 aaKnown RBP9.82□□□□□ -0.84
HDAC6-221ENST00000477561 NEDD1Q8NHV4 660 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 PXYLP1Q8TE99 480 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 MOV10L1Q9BXT6 1211 aaKnown RBP9.82□□□□□ -0.84
HDAC6-221ENST00000477561 MTMR4Q9NYA4 1195 aa9.82□□□□□ -0.84
HDAC6-221ENST00000477561 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.82□□□□□ -0.84
HDAC6-221ENST00000477561 TSPY2A6NKD2 308 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 TTLL1O95922 423 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 NDUFB10O96000 172 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 PTPREP23469 700 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 CCL14Q16627 93 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 MORN1Q5T089 497 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 TICAM2Q86XR7 235 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 TRIB2Q92519 343 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 USP6NLQ92738 828 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 MKL1Q969V6 931 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 DEFB118Q96PH6 123 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 SPATC1LQ9H0A9 340 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 IL17RBQ9NRM6 502 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 ANAPC4Q9UJX5 808 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 ISY1Q9ULR0 285 aaKnown RBP9.81□□□□□ -0.84
HDAC6-221ENST00000477561 MTMR7Q9Y216 660 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 DOCK3Q8IZD9 2030 aa9.81□□□□□ -0.84
HDAC6-221ENST00000477561 GREB1LQ9C091 1923 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-221ENST00000477561 HIP1O00291 1037 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 HMGCRP04035 888 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 GJB1P08034 283 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 ERCC3P19447 782 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 RGS2P41220 211 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 SLC4A3P48751 1232 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 MFAP1P55081 439 aaKnown RBP9.8□□□□□ -0.84
HDAC6-221ENST00000477561 MAP2K5Q13163 448 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 TMEM132BQ14DG7 1078 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 SLFN13Q68D06 897 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 SKAP1Q86WV1 359 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 NCAPG2Q86XI2 1143 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 NKX2-3Q8TAU0 364 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 U2AF1L4Q8WU68 220 aaKnown RBP9.8□□□□□ -0.84
HDAC6-221ENST00000477561 SOCS4Q8WXH5 440 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 SHISA4Q96DD7 197 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 IL25Q9H293 177 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 STX8Q9UNK0 236 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 IVNS1ABPQ9Y6Y0 642 aa9.8□□□□□ -0.84
HDAC6-221ENST00000477561 PLXNB2O15031 1838 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 SLC15A5A6NIM6 579 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 VWA5AO00534 786 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 ORC4O43929 436 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 TFRCP02786 760 aaKnown RBP9.79□□□□□ -0.84
HDAC6-221ENST00000477561 ZKSCAN1P17029 563 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-221ENST00000477561 GJA8P48165 433 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 MFSD6Q6ZSS7 791 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 TBC1D10CQ8IV04 446 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 MB21D1Q8N884 522 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 NPLOC4Q8TAT6 608 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC6-221ENST00000477561 HMX1Q9NP08 348 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-221ENST00000477561 FLRT1Q9NZU1 646 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 PPP1R9AQ9ULJ8 1098 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 ADAMTS5Q9UNA0 930 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 RLFQ13129 1914 aa9.79□□□□□ -0.84
HDAC6-221ENST00000477561 MKI67P46013 3256 aaKnown RBP9.78□□□□□ -0.84
HDAC6-221ENST00000477561 PLIN4Q96Q06 1357 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 KIAA0100Q14667 2235 aaKnown RBP9.78□□□□□ -0.84
HDAC6-221ENST00000477561 ZNF213O14771 459 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 SGPL1O95470 568 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 FGRP09769 529 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 BMP3P12645 472 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 XRCC5P13010 732 aaKnown RBP9.78□□□□□ -0.84
HDAC6-221ENST00000477561 PRKAR2AP13861 404 aaKnown RBP9.78□□□□□ -0.84
HDAC6-221ENST00000477561 MCCP23508 829 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 ADORA2AP29274 412 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 STAT3P40763 770 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 CACNB2Q08289 660 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-221ENST00000477561 GRB14Q14449 540 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 AKNAD1Q5T1N1 836 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 KCTD1Q719H9 257 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 RASGRP2Q7LDG7 609 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 DPP9Q86TI2 863 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 CPXCR1Q8N123 301 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 PRPF38AQ8NAV1 312 aaKnown RBP9.78□□□□□ -0.84
HDAC6-221ENST00000477561 GMCL1P1Q8NEA9 526 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 APBA2Q99767 749 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 CTDP1Q9Y5B0 961 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-221ENST00000477561 ZMYM6O95789 1325 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 RPTORQ8N122 1335 aa9.78□□□□□ -0.84
HDAC6-221ENST00000477561 RBBP6Q7Z6E9 1792 aaKnown RBP9.78□□□□□ -0.84
HDAC6-221ENST00000477561 TMEM232C9JQI7 657 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 COBLO75128 1261 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 ZBED4O75132 1171 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 CHMLP26374 656 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 CCND3P30281 292 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-221ENST00000477561 CYP2C19P33261 490 aa9.77□□□□□ -0.85
HDAC6-221ENST00000477561 SLC1A4P43007 532 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms