RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TMEM110-MUSTN1A8MSY1 372 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 TXNDC9O14530 226 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 RASA3Q14644 834 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 PREPLQ4J6C6 727 aaPredicted RBP12.74□□□□□ -0.37
U2AF1-209ENST00000475639 TAOK1Q7L7X3 1001 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 CAPZA3Q96KX2 299 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 CDC5LQ99459 802 aaKnown RBP12.74□□□□□ -0.37
U2AF1-209ENST00000475639 CACYBPQ9HB71 228 aaKnown RBP12.74□□□□□ -0.37
U2AF1-209ENST00000475639 ZBTB43O43298 467 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 PFKFB2O60825 505 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 WTAPQ15007 396 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
U2AF1-209ENST00000475639 MYD88Q99836 296 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 LLPHQ9BRT6 129 aaKnown RBP12.74□□□□□ -0.37
U2AF1-209ENST00000475639 TSPYL2Q9H2G4 693 aaPredicted RBP12.74□□□□□ -0.37
U2AF1-209ENST00000475639 ADGRG1Q9Y653 693 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 PXDNLA1KZ92 1463 aa12.74□□□□□ -0.37
U2AF1-209ENST00000475639 AGPSO00116 658 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 CHUKO15111 745 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 CUL4BQ13620 913 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 UAP1Q16222 522 aaPredicted RBP12.73□□□□□ -0.37
U2AF1-209ENST00000475639 SEL1L2Q5TEA6 688 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 UBLCP1Q8WVY7 318 aaPredicted RBP12.73□□□□□ -0.37
U2AF1-209ENST00000475639 MAK16Q9BXY0 300 aaKnown RBP12.73□□□□□ -0.37
U2AF1-209ENST00000475639 TRIM75PA6NK02 468 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 GCFC2P16383 781 aaKnown RBP12.73□□□□□ -0.37
U2AF1-209ENST00000475639 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 JCADQ9P266 1359 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 ZBTB17Q13105 803 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 TRPC3Q13507 836 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 ANKRD20A3Q5VUR7 823 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 TTC19Q6DKK2 380 aaPredicted RBP12.73□□□□□ -0.37
U2AF1-209ENST00000475639 RAD9BQ6WBX8 426 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 RUFY4Q6ZNE9 571 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 ZNF365Q70YC5 407 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 GDAP1L1Q96MZ0 367 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 TUBE1Q9UJT0 475 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 KLF18A0A0U1RQI7 1052 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 EIF3HO15372 352 aaKnown RBP eCLIP12.73□□□□□ -0.37
U2AF1-209ENST00000475639 SMIM24O75264 130 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 ARHGAP25P42331 645 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 HAND2P61296 217 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
U2AF1-209ENST00000475639 TEX11Q8IYF3 940 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 VTI1AQ96AJ9 217 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 ALG1Q9BT22 464 aa12.73□□□□□ -0.37
U2AF1-209ENST00000475639 BUB1BO60566 1050 aaPredicted RBP12.72□□□□□ -0.37
U2AF1-209ENST00000475639 FSBPO95073 299 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 PFKFB1P16118 471 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 IDI1Q13907 227 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 LGSNQ5TDP6 509 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 RSPH3Q86UC2 560 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 THEMISQ8N1K5 641 aaPredicted RBP12.72□□□□□ -0.37
U2AF1-209ENST00000475639 SLC35F6Q8N357 371 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 COG1Q8WTW3 980 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 DDX27Q96GQ7 796 aaKnown RBP12.72□□□□□ -0.37
U2AF1-209ENST00000475639 E7EVH7 732 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 RPL13P26373 211 aaKnown RBP12.72□□□□□ -0.37
U2AF1-209ENST00000475639 PPP1R21Q6ZMI0 780 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 FAM43BQ6ZT52 329 aaPredicted RBP12.72□□□□□ -0.37
U2AF1-209ENST00000475639 ARHGEF25Q86VW2 580 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 ESR2Q92731 530 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 RBM28Q9NW13 759 aaKnown RBP12.72□□□□□ -0.37
U2AF1-209ENST00000475639 ABL1P00519 1130 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 TUBB2AQ13885 445 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 TUBB2BQ9BVA1 445 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 CRNKL1Q9BZJ0 848 aaKnown RBP12.72□□□□□ -0.37
U2AF1-209ENST00000475639 TMOD3Q9NYL9 352 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 MROH7-TTC4A0A0A0MT08 1334 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 SALL1Q9NSC2 1324 aa12.72□□□□□ -0.37
U2AF1-209ENST00000475639 CALML3P27482 149 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 ZNF131P52739 623 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 SLC8A3P57103 927 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 CNGA4Q8IV77 575 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 CAPS2Q9BXY5 557 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 ANKFY1Q9P2R3 1169 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 ALDH1L1O75891 902 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 WLSQ5T9L3 541 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 NCAPH2Q6IBW4 605 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 GSDMBQ8TAX9 411 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 SEPT8Q92599 483 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.37
U2AF1-209ENST00000475639 TAF5LO75529 589 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 HPDP32754 393 aaPredicted RBP12.71□□□□□ -0.37
U2AF1-209ENST00000475639 MCM7P33993 719 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 IRX4P78413 519 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 CCDC122Q5T0U0 273 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
U2AF1-209ENST00000475639 NCOA5Q9HCD5 579 aaKnown RBP12.71□□□□□ -0.37
U2AF1-209ENST00000475639 NRKQ7Z2Y5 1582 aa12.71□□□□□ -0.38
U2AF1-209ENST00000475639 COL15A1P39059 1388 aa12.71□□□□□ -0.38
U2AF1-209ENST00000475639 SPTLC2O15270 562 aa12.71□□□□□ -0.38
U2AF1-209ENST00000475639 CDC27P30260 824 aa12.71□□□□□ -0.38
U2AF1-209ENST00000475639 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms