RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 USP17L15C9J2P7 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 USP17L13C9JLJ4 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 USP17L11C9JVI0 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 USP17L18D6R9N7 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 USP17L22D6RA61 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 USP17L17D6RBQ6 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 USP17L19D6RCP7 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 USP17L20D6RJB6 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 PRC1O43663 620 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 ECM2O94769 699 aaPredicted RBP15.55■□□□□ 0.08
BRAT1-205ENST00000473879 CD2BP2O95400 341 aaKnown RBP15.55■□□□□ 0.08
BRAT1-205ENST00000473879 SOX10P56693 466 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 HERVK_113P62684 666 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 EXOSC10Q01780 885 aaKnown RBP15.55■□□□□ 0.08
BRAT1-205ENST00000473879 USP17L24Q0WX57 530 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 SART3Q15020 963 aaKnown RBP15.55■□□□□ 0.08
BRAT1-205ENST00000473879 NBPF11Q86T75 865 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 TMEM87BQ96K49 555 aa15.55■□□□□ 0.08
BRAT1-205ENST00000473879 MYPNQ86TC9 1320 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 KDM4AO75164 1064 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 VCAM1P19320 739 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 ICA1Q05084 483 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 SLC9C1Q4G0N8 1177 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 CATSPERGQ6ZRH7 1159 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 Q6ZUG5 572 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 STK11IPQ8N1F8 1099 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 FBXL16Q8N461 479 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 ZSCAN31Q96LW9 406 aaPredicted RBP15.54■□□□□ 0.08
BRAT1-205ENST00000473879 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 KANSL2Q9H9L4 492 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 MKNK2Q9HBH9 465 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 LIMCH1Q9UPQ0 1083 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 TMX2Q9Y320 296 aa15.54■□□□□ 0.08
BRAT1-205ENST00000473879 ERICH2A1L162 156 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 TNPO2O14787 897 aaKnown RBP15.53■□□□□ 0.08
BRAT1-205ENST00000473879 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
BRAT1-205ENST00000473879 PRKCZQ05513 592 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 IQCA1Q86XH1 822 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 NKX2-3Q8TAU0 364 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 RAET1EQ8TD07 263 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 ZNF333Q96JL9 665 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 TCEANC2Q96MN5 208 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 AGXT2Q9BYV1 514 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 SH2B1Q9NRF2 756 aaPredicted RBP15.53■□□□□ 0.08
BRAT1-205ENST00000473879 RBPJLQ9UBG7 517 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 SYNPO2Q9UMS6 1093 aa15.53■□□□□ 0.08
BRAT1-205ENST00000473879 HSP90AA1P07900 732 aaKnown RBP15.52■□□□□ 0.08
BRAT1-205ENST00000473879 ANTXR2P58335 489 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 TOB2Q14106 344 aaPredicted RBP15.52■□□□□ 0.08
BRAT1-205ENST00000473879 LBX2Q6XYB7 198 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 NOL8Q76FK4 1167 aaKnown RBP15.52■□□□□ 0.08
BRAT1-205ENST00000473879 CYB5R4Q7L1T6 521 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 ZNF444Q8N0Y2 327 aaPredicted RBP15.52■□□□□ 0.08
BRAT1-205ENST00000473879 GPRC5AQ8NFJ5 357 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 NEDD1Q8NHV4 660 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 LPAR1Q92633 364 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 COA7Q96BR5 231 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 UBAC1Q9BSL1 405 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 RPAP3Q9H6T3 665 aaPredicted RBP15.52■□□□□ 0.08
BRAT1-205ENST00000473879 TXNRD2Q9NNW7 524 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 INCENPQ9NQS7 918 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 ZSWIM5Q9P217 1185 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 GABRQQ9UN88 632 aa15.52■□□□□ 0.08
BRAT1-205ENST00000473879 MYH4Q9Y623 1939 aa15.52■□□□□ 0.07
BRAT1-205ENST00000473879 TSPY2A6NKD2 308 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 PRDM1O75626 825 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 EEF2P13639 858 aaKnown RBP15.51■□□□□ 0.07
BRAT1-205ENST00000473879 MLLT1Q03111 559 aaPredicted RBP15.51■□□□□ 0.07
BRAT1-205ENST00000473879 IRF5Q13568 498 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 COL9A3Q14050 684 aaPredicted RBP15.51■□□□□ 0.07
BRAT1-205ENST00000473879 CCDC178Q5BJE1 867 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 POTEEQ6S8J3 1075 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 CHST3Q7LGC8 479 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 CLEC10AQ8IUN9 316 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 BRF1Q92994 677 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 MKL1Q969V6 931 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 TMX3Q96JJ7 454 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 LRRC2Q9BYS8 371 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 VCPKMTQ9H867 229 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 RABGAP1Q9Y3P9 1069 aa15.51■□□□□ 0.07
BRAT1-205ENST00000473879 SH2B2O14492 632 aaPredicted RBP15.5■□□□□ 0.07
BRAT1-205ENST00000473879 IFIT3O14879 490 aaKnown RBP15.5■□□□□ 0.07
BRAT1-205ENST00000473879 GRK4P32298 578 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 FLT3LGP49771 235 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 ERVK-9P63128 1117 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 ERVK-24P63145 666 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 COG2Q14746 738 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 Q3C1V9 767 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 TMEM67Q5HYA8 995 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 KIAA1755Q5JYT7 1200 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 TMTC2Q8N394 836 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 SLAIN1Q8ND83 568 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 SH3TC2Q8TF17 1288 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 CHMP4CQ96CF2 233 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 IL17RBQ9NRM6 502 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 HOXC10Q9NYD6 342 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 NYAP2Q9P242 653 aa15.5■□□□□ 0.07
BRAT1-205ENST00000473879 MKI67P46013 3256 aaKnown RBP15.49■□□□□ 0.07
BRAT1-205ENST00000473879 SPDYE16A6NNV3 312 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms