RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ZNF333Q96JL9 665 aa22.4■■□□□ 1.18
PTCD3-210ENST00000473829 GJD2Q9UKL4 321 aa22.4■■□□□ 1.18
PTCD3-210ENST00000473829 SYNPO2Q9UMS6 1093 aa22.4■■□□□ 1.18
PTCD3-210ENST00000473829 STX8Q9UNK0 236 aa22.4■■□□□ 1.18
PTCD3-210ENST00000473829 PCP11498 1178 aaKnown RBP22.39■■□□□ 1.17
PTCD3-210ENST00000473829 RNF41Q9H4P4 317 aaPredicted RBP22.39■■□□□ 1.17
PTCD3-210ENST00000473829 MAPK4P31152 587 aa22.38■■□□□ 1.17
PTCD3-210ENST00000473829 GRK4P32298 578 aa22.38■■□□□ 1.17
PTCD3-210ENST00000473829 IMMTQ16891 758 aaKnown RBP22.38■■□□□ 1.17
PTCD3-210ENST00000473829 GPR142Q7Z601 462 aa22.38■■□□□ 1.17
PTCD3-210ENST00000473829 CTNNA3Q9UI47 895 aa22.38■■□□□ 1.17
PTCD3-210ENST00000473829 PPP1R9AQ9ULJ8 1098 aa22.38■■□□□ 1.17
PTCD3-210ENST00000473829 ADAMTS5Q9UNA0 930 aa22.38■■□□□ 1.17
PTCD3-210ENST00000473829 ELNP15502 786 aa22.37■■□□□ 1.17
PTCD3-210ENST00000473829 IRF5Q13568 498 aa22.37■■□□□ 1.17
PTCD3-210ENST00000473829 SLFN13Q68D06 897 aa22.37■■□□□ 1.17
PTCD3-210ENST00000473829 CHMP4CQ96CF2 233 aa22.37■■□□□ 1.17
PTCD3-210ENST00000473829 MOV10L1Q9BXT6 1211 aaKnown RBP22.37■■□□□ 1.17
PTCD3-210ENST00000473829 TCP11L1Q9NUJ3 509 aa22.37■■□□□ 1.17
PTCD3-210ENST00000473829 ADCY3O60266 1144 aa22.36■■□□□ 1.17
PTCD3-210ENST00000473829 MYCP01106 439 aaPredicted RBP22.36■■□□□ 1.17
PTCD3-210ENST00000473829 TMEM132BQ14DG7 1078 aa22.36■■□□□ 1.17
PTCD3-210ENST00000473829 RCSD1Q6JBY9 416 aa22.36■■□□□ 1.17
PTCD3-210ENST00000473829 PLEKHH3Q7Z736 793 aa22.36■■□□□ 1.17
PTCD3-210ENST00000473829 MB21D1Q8N884 522 aa22.36■■□□□ 1.17
PTCD3-210ENST00000473829 ESYT1Q9BSJ8 1104 aa22.36■■□□□ 1.17
PTCD3-210ENST00000473829 SPATC1LQ9H0A9 340 aa22.36■■□□□ 1.17
PTCD3-210ENST00000473829 TAF6LQ9Y6J9 622 aa22.36■■□□□ 1.17
PTCD3-210ENST00000473829 B4E1Z4 1266 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 VWA5AO00534 786 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 KDM4AO75164 1064 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 CYP21A2P08686 494 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 CCNA1P78396 465 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 PPP4R3BQ5MIZ7 849 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 NBPF11Q86T75 865 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 SLAIN1Q8ND83 568 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 REPS2Q8NFH8 660 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 ESR2Q92731 530 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 GMCL1Q96IK5 515 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 SLF1Q9BQI6 1058 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 ZKSCAN3Q9BRR0 538 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
PTCD3-210ENST00000473829 ZNF236Q9UL36 1845 aa22.34■■□□□ 1.17
PTCD3-210ENST00000473829 POTEFA5A3E0 1075 aa22.34■■□□□ 1.17
PTCD3-210ENST00000473829 MCCP23508 829 aa22.34■■□□□ 1.17
PTCD3-210ENST00000473829 MTFR1Q15390 333 aa22.34■■□□□ 1.17
PTCD3-210ENST00000473829 MORN1Q5T089 497 aa22.34■■□□□ 1.17
PTCD3-210ENST00000473829 WDR78Q5VTH9 848 aa22.34■■□□□ 1.17
PTCD3-210ENST00000473829 CCAR1Q8IX12 1150 aaKnown RBP22.34■■□□□ 1.17
PTCD3-210ENST00000473829 USP6NLQ92738 828 aa22.34■■□□□ 1.17
PTCD3-210ENST00000473829 TMEM47Q9BQJ4 181 aa22.34■■□□□ 1.17
PTCD3-210ENST00000473829 U3KPZ7 1027 aaPredicted RBP22.34■■□□□ 1.17
PTCD3-210ENST00000473829 BMP3P12645 472 aa22.33■■□□□ 1.17
PTCD3-210ENST00000473829 PLS1Q14651 629 aa22.33■■□□□ 1.17
PTCD3-210ENST00000473829 ERICH6BQ5W0A0 696 aa22.33■■□□□ 1.17
PTCD3-210ENST00000473829 PXYLP1Q8TE99 480 aa22.33■■□□□ 1.17
PTCD3-210ENST00000473829 SOCS4Q8WXH5 440 aa22.33■■□□□ 1.17
PTCD3-210ENST00000473829 MAP4K1Q92918 833 aa22.33■■□□□ 1.17
PTCD3-210ENST00000473829 NUDT12Q9BQG2 462 aa22.33■■□□□ 1.17
PTCD3-210ENST00000473829 LSG1Q9H089 658 aaKnown RBP22.33■■□□□ 1.17
PTCD3-210ENST00000473829 ZNF214Q9UL59 606 aaPredicted RBP22.33■■□□□ 1.17
PTCD3-210ENST00000473829 MTMR7Q9Y216 660 aa22.33■■□□□ 1.17
PTCD3-210ENST00000473829 TOP1P11387 765 aaKnown RBP22.32■■□□□ 1.16
PTCD3-210ENST00000473829 ERCC3P19447 782 aa22.32■■□□□ 1.16
PTCD3-210ENST00000473829 CYP2B6P20813 491 aa22.32■■□□□ 1.16
PTCD3-210ENST00000473829 RGS19P49795 217 aa22.32■■□□□ 1.16
PTCD3-210ENST00000473829 KIFC2Q96AC6 838 aa22.32■■□□□ 1.16
PTCD3-210ENST00000473829 FEM1BQ9UK73 627 aa22.32■■□□□ 1.16
PTCD3-210ENST00000473829 RBM8AQ9Y5S9 174 aaKnown RBP22.32■■□□□ 1.16
PTCD3-210ENST00000473829 KIAA0100Q14667 2235 aaKnown RBP22.32■■□□□ 1.16
PTCD3-210ENST00000473829 MKI67P46013 3256 aaKnown RBP22.32■■□□□ 1.16
PTCD3-210ENST00000473829 TMEM232C9JQI7 657 aa22.31■■□□□ 1.16
PTCD3-210ENST00000473829 INHAP05111 366 aa22.31■■□□□ 1.16
PTCD3-210ENST00000473829 PTPREP23469 700 aa22.31■■□□□ 1.16
PTCD3-210ENST00000473829 SLC1A4P43007 532 aa22.31■■□□□ 1.16
PTCD3-210ENST00000473829 KCTD1Q719H9 257 aa22.31■■□□□ 1.16
PTCD3-210ENST00000473829 PRPF38AQ8NAV1 312 aaKnown RBP22.31■■□□□ 1.16
PTCD3-210ENST00000473829 SHCBP1Q8NEM2 672 aa22.31■■□□□ 1.16
PTCD3-210ENST00000473829 TRIB2Q92519 343 aa22.31■■□□□ 1.16
PTCD3-210ENST00000473829 CWC22Q9HCG8 908 aaKnown RBP22.31■■□□□ 1.16
PTCD3-210ENST00000473829 ZSWIM5Q9P217 1185 aa22.31■■□□□ 1.16
PTCD3-210ENST00000473829 ISY1Q9ULR0 285 aaKnown RBP22.31■■□□□ 1.16
PTCD3-210ENST00000473829 TRIM32Q13049 653 aa22.3■■□□□ 1.16
PTCD3-210ENST00000473829 GRB14Q14449 540 aa22.3■■□□□ 1.16
PTCD3-210ENST00000473829 STOX1Q6ZVD7 989 aa22.3■■□□□ 1.16
PTCD3-210ENST00000473829 CYB5R4Q7L1T6 521 aa22.3■■□□□ 1.16
PTCD3-210ENST00000473829 NCAPG2Q86XI2 1143 aa22.3■■□□□ 1.16
PTCD3-210ENST00000473829 KRT23Q9C075 422 aa22.3■■□□□ 1.16
PTCD3-210ENST00000473829 BIN2Q9UBW5 565 aaPredicted RBP22.3■■□□□ 1.16
PTCD3-210ENST00000473829 SLC15A5A6NIM6 579 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 CDC45O75419 566 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 NT5C2P49902 561 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 STAT2P52630 851 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 MAP2K5Q13163 448 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 CCL14Q16627 93 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 RIOX2Q8IUF8 465 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 TTC14Q96N46 770 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 APBA2Q99767 749 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 CNNM2Q9H8M5 875 aa22.29■■□□□ 1.16
PTCD3-210ENST00000473829 ZNFX1Q9P2E3 1918 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms