RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 ZBTB48P10074 688 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 KIF5BP33176 963 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 SLC1A4P43007 532 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 ZNF157P51786 506 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 ZNF543Q08ER8 600 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 SCRN1Q12765 414 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 MKRN3Q13064 507 aaKnown RBP14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 BECN1Q14457 450 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 ASPRV1Q53RT3 343 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 SH3D19Q5HYK7 790 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 SPRYD7Q5W111 196 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 GMCL1Q96IK5 515 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 C12orf42Q96LP6 360 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 NUP88Q99567 741 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 NCOA5Q9HCD5 579 aaKnown RBP14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 RBM28Q9NW13 759 aaKnown RBP14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 TMOD4Q9NZQ9 345 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 SMCHD1A6NHR9 2005 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 THSD7BQ9C0I4 1608 aa14.63□□□□□ -0.07
TRAPPC12-217ENST00000473348 A0A0G2JLL6 359 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 WDR46O15213 610 aaKnown RBP14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 BMP3P12645 472 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 VCAM1P19320 739 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 CDC27P30260 824 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 ST3GAL1Q11201 340 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 FAM83BQ5T0W9 1011 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 PRRT2Q7Z6L0 340 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 CCDC83Q8IWF9 413 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 HHIPL1Q96JK4 782 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 GPCPD1Q9NPB8 672 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 CREBZFQ9NS37 354 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 MAD2L2Q9UI95 211 aa14.62□□□□□ -0.07
TRAPPC12-217ENST00000473348 CCDC196A0A1B0GTZ2 297 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 PALM3A6NDB9 673 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 SLC10A3P09131 477 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 GOLGA8HP0CJ92 632 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 SNAPC2Q13487 334 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 PPP2R5BQ15173 497 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 GPATCH4Q5T3I0 446 aaKnown RBP14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 GADL1Q6ZQY3 521 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 TMTC3Q6ZXV5 915 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 STAG2Q8N3U4 1231 aa14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 PROCA1Q8NCQ7 364 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 FAM217BQ9NTX9 383 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC12-217ENST00000473348 CPLX1O14810 134 aa14.6□□□□□ -0.07
TRAPPC12-217ENST00000473348 DHX16O60231 1041 aaKnown RBP14.6□□□□□ -0.07
TRAPPC12-217ENST00000473348 PLEKHA8P1O95397 391 aa14.6□□□□□ -0.07
TRAPPC12-217ENST00000473348 ADD1P35611 737 aaKnown RBP14.6□□□□□ -0.07
TRAPPC12-217ENST00000473348 GNAQP50148 359 aa14.6□□□□□ -0.07
TRAPPC12-217ENST00000473348 GTF2A2P52657 109 aa14.6□□□□□ -0.07
TRAPPC12-217ENST00000473348 TANGO6Q9C0B7 1094 aa14.6□□□□□ -0.07
TRAPPC12-217ENST00000473348 RPAP3Q9H6T3 665 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC12-217ENST00000473348 CCL15-CCL14A0A0B4J2E2 113 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 KLRF2D3W0D1 207 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 CETPP11597 493 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 IKQ13123 557 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 CUL4AQ13619 759 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 CCL15Q16663 113 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 TREML2Q5T2D2 321 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 TTBK2Q6IQ55 1244 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 CPLX2Q6PUV4 134 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 FASTKD5Q7L8L6 764 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 CMTR1Q8N1G2 835 aaKnown RBP14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 CCDC102AQ96A19 550 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 CPVLQ9H3G5 476 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 CNTNAP5Q8WYK1 1306 aa14.59□□□□□ -0.07
TRAPPC12-217ENST00000473348 MYH15Q9Y2K3 1946 aa14.58□□□□□ -0.07
TRAPPC12-217ENST00000473348 RASSF10A6NK89 507 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 FAM155AB1AL88 458 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 TMEM232C9JQI7 657 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 CDKL5O76039 1030 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 SLC16A2P36021 539 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 STAT2P52630 851 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 MOGSQ13724 837 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 NTRK3Q16288 839 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 CYP4F22Q6NT55 531 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 SRBD1Q8N5C6 995 aaKnown RBP14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 NSUN7Q8NE18 718 aaKnown RBP14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 MS4A4AQ96JQ5 239 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 LZTS2Q9BRK4 669 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 SPZ1Q9BXG8 430 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 FBXO28Q9NVF7 368 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 AGTPBP1Q9UPW5 1226 aa14.58□□□□□ -0.08
TRAPPC12-217ENST00000473348 PTPDC1A2A3K4 754 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 MANSC4A6NHS7 340 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 DTNBO60941 627 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 FLOT1O75955 427 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 CTDNEP1O95476 244 aa14.57□□□□□ -0.08
TRAPPC12-217ENST00000473348 HSP90AA1P07900 732 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms