RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 SMC5Q8IY18 1101 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 ZNF444Q8N0Y2 327 aaPredicted RBP10.76□□□□□ -0.69
USF1-204ENST00000472217 ANKLE1Q8NAG6 615 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 NPLOC4Q8TAT6 608 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 EVI5LQ96CN4 794 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 NUP88Q99567 741 aaPredicted RBP10.76□□□□□ -0.69
USF1-204ENST00000472217 LNPKQ9C0E8 428 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 NAPBQ9H115 298 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 ZNF287Q9HBT7 754 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 ADAMTS5Q9UNA0 930 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 ALPK3Q96L96 1907 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 PLIN4Q96Q06 1357 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
USF1-204ENST00000472217 MKI67P46013 3256 aaKnown RBP10.75□□□□□ -0.69
USF1-204ENST00000472217 STRNO43815 780 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 IGHDP01880 384 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 ADORA2AP29274 412 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
USF1-204ENST00000472217 TMEM132BQ14DG7 1078 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 MFSD14CQ5VZR4 134 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 B4GALNT3Q6L9W6 998 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 NECAB2Q7Z6G3 386 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 NCAPG2Q86XI2 1143 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 CEP95Q96GE4 821 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 RWDD1Q9H446 243 aaPredicted RBP10.75□□□□□ -0.69
USF1-204ENST00000472217 MROH8Q9H579 483 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 OGDHLQ9ULD0 1010 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 PPP1R9AQ9ULJ8 1098 aa10.75□□□□□ -0.69
USF1-204ENST00000472217 A0A0D9SFI3 127 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 F5H6K3 240 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 VWA5AO00534 786 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 COBLO75128 1261 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 NDUFB10O96000 172 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 IGHA2P01877 340 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 SLC3A2P08195 630 aaKnown RBP10.74□□□□□ -0.69
USF1-204ENST00000472217 CYP2C19P33261 490 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 PDE4BQ07343 736 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 KLRC3Q07444 240 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 FAM47AQ5JRC9 791 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 VPS53Q5VIR6 699 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 LHX8Q68G74 356 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 DPP9Q86TI2 863 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 CHD1LQ86WJ1 897 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 REPS2Q8NFH8 660 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 FAM227BQ96M60 508 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 MTMR4Q9NYA4 1195 aa10.74□□□□□ -0.69
USF1-204ENST00000472217 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
USF1-204ENST00000472217 EVI5O60447 810 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 SLC25A27O95847 323 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 TTLL1O95922 423 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 TSPY3P0CV98 308 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 TSPY8P0CW00 308 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 CYBAP13498 195 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 NUCB1Q02818 461 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 CTDSPL2Q05D32 466 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 OLFML2BQ68BL8 750 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 RIOX2Q8IUF8 465 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 ABRAQ8N0Z2 381 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 LRRC47Q8N1G4 583 aaKnown RBP10.73□□□□□ -0.69
USF1-204ENST00000472217 NEDD1Q8NHV4 660 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 MKL1Q969V6 931 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 SLF1Q9BQI6 1058 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 NBPF3Q9H094 633 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 C11orf49Q9H6J7 331 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 HELLSQ9NRZ9 838 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 ZNF214Q9UL59 606 aaPredicted RBP10.73□□□□□ -0.69
USF1-204ENST00000472217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
USF1-204ENST00000472217 NR2E3Q9Y5X4 410 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 PFASO15067 1338 aa10.73□□□□□ -0.69
USF1-204ENST00000472217 TRIM6-TRIM34B2RNG4 842 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 FCER1AP12319 257 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 CNGA1P29973 690 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 STAT3P40763 770 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 TFAP4Q01664 338 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
USF1-204ENST00000472217 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 ZNF589Q86UQ0 364 aaPredicted RBP10.72□□□□□ -0.69
USF1-204ENST00000472217 PLEKHM2Q8IWE5 1019 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 GMCL1P1Q8NEA9 526 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 TRPV1Q8NER1 839 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 RILPL2Q969X0 211 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 INCENPQ9NQS7 918 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 DDX20Q9UHI6 824 aaKnown RBP10.72□□□□□ -0.69
USF1-204ENST00000472217 ANAPC4Q9UJX5 808 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 SYNPO2Q9UMS6 1093 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 SUPT16HQ9Y5B9 1047 aaKnown RBP10.72□□□□□ -0.69
USF1-204ENST00000472217 TACC3Q9Y6A5 838 aa10.72□□□□□ -0.69
USF1-204ENST00000472217 TSPY2A6NKD2 308 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 PGK2P07205 417 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 COL6A1P12109 1028 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 KCTD2Q14681 263 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 ALX1Q15699 326 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 MCMDC2Q4G0Z9 681 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 SNRNP48Q6IEG0 339 aaKnown RBP10.71□□□□□ -0.69
USF1-204ENST00000472217 TICAM2Q86XR7 235 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 C7orf61Q8IZ16 206 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
USF1-204ENST00000472217 MAML3Q96JK9 1138 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 MMP19Q99542 508 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms