RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MYH1P12882 1939 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 F5H6K3 240 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 M0R2C6 588 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 VWA5AO00534 786 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 SLC25A27O95847 323 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-210ENST00000469897 PGK2P07205 417 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 STAT3P40763 770 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 TDO2P48775 406 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 ATN1P54259 1190 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-210ENST00000469897 KLRC3Q07444 240 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 ZNF444Q8N0Y2 327 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-210ENST00000469897 ABRAQ8N0Z2 381 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 OTUD7AQ8TE49 926 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-210ENST00000469897 SEC62Q99442 399 aaKnown RBP15.89■□□□□ 0.13
CPSF4-210ENST00000469897 NUP88Q99567 741 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-210ENST00000469897 EPB41L4AQ9HCS5 686 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-210ENST00000469897 DOCK3Q8IZD9 2030 aa15.89■□□□□ 0.13
CPSF4-210ENST00000469897 PRDM1O75626 825 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 GNAT2P19087 354 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 RIOX2Q8IUF8 465 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 IFNL3Q8IZI9 196 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 ARRDC4Q8NCT1 418 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 MAML3Q96JK9 1138 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 MMP19Q99542 508 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 UBE2OQ9C0C9 1292 aaKnown RBP15.88■□□□□ 0.13
CPSF4-210ENST00000469897 NYAP2Q9P242 653 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 PPP1R9AQ9ULJ8 1098 aa15.88■□□□□ 0.13
CPSF4-210ENST00000469897 DNM1LO00429 736 aa15.87■□□□□ 0.13
CPSF4-210ENST00000469897 MDM2Q00987 491 aaPredicted RBP15.87■□□□□ 0.13
CPSF4-210ENST00000469897 KCTD2Q14681 263 aa15.87■□□□□ 0.13
CPSF4-210ENST00000469897 PI4K2BQ8TCG2 481 aa15.87■□□□□ 0.13
CPSF4-210ENST00000469897 ERC2O15083 957 aa15.86■□□□□ 0.13
CPSF4-210ENST00000469897 SEPT4O43236 478 aa15.86■□□□□ 0.13
CPSF4-210ENST00000469897 SLC4A3P48751 1232 aa15.86■□□□□ 0.13
CPSF4-210ENST00000469897 LRRFIP1Q32MZ4 808 aaKnown RBP15.86■□□□□ 0.13
CPSF4-210ENST00000469897 REPS2Q8NFH8 660 aa15.86■□□□□ 0.13
CPSF4-210ENST00000469897 ZNF214Q9UL59 606 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-210ENST00000469897 TTC41PQ6P2S7 1318 aa15.86■□□□□ 0.13
CPSF4-210ENST00000469897 DDX60LQ5H9U9 1706 aaKnown RBP15.85■□□□□ 0.13
CPSF4-210ENST00000469897 IGKV6D-41A0A0C4DH26 115 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 NDUFB10O96000 172 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 ZNF792Q3KQV3 632 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 SLC39A5Q6ZMH5 540 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 PRPF38AQ8NAV1 312 aaKnown RBP15.85■□□□□ 0.13
CPSF4-210ENST00000469897 MKL1Q969V6 931 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 SLF1Q9BQI6 1058 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 FSD1Q9BTV5 496 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 NACAP1Q9BZK3 213 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 ZNF287Q9HBT7 754 aa15.85■□□□□ 0.13
CPSF4-210ENST00000469897 KBTBD13C9JR72 458 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 TAL1P17542 331 aaPredicted RBP15.84■□□□□ 0.13
CPSF4-210ENST00000469897 ADCYAP1R1P41586 468 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 FAM47AQ5JRC9 791 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 ANKRD45Q5TZF3 282 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 TDHQ8IZJ6 230 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 CPXCR1Q8N123 301 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 FERMT2Q96AC1 680 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 KIFC2Q96AC6 838 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 CEP95Q96GE4 821 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 TINF2Q9BSI4 451 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 MTMR4Q9NYA4 1195 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 ATP11BQ9Y2G3 1177 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 RIPK3Q9Y572 518 aa15.84■□□□□ 0.13
CPSF4-210ENST00000469897 ZBED4O75132 1171 aa15.83■□□□□ 0.12
CPSF4-210ENST00000469897 RTP1P59025 263 aa15.83■□□□□ 0.12
CPSF4-210ENST00000469897 TFAP4Q01664 338 aa15.83■□□□□ 0.12
CPSF4-210ENST00000469897 LRIT3Q3SXY7 679 aa15.83■□□□□ 0.12
CPSF4-210ENST00000469897 ZMYM1Q5SVZ6 1142 aa15.83■□□□□ 0.12
CPSF4-210ENST00000469897 DDX11Q96FC9 970 aa15.83■□□□□ 0.12
CPSF4-210ENST00000469897 LBHD1Q9BQE6 289 aaPredicted RBP15.83■□□□□ 0.12
CPSF4-210ENST00000469897 DIS3Q9Y2L1 958 aaKnown RBP15.83■□□□□ 0.12
CPSF4-210ENST00000469897 CEP290O15078 2479 aa15.83■□□□□ 0.12
CPSF4-210ENST00000469897 NAV1Q8NEY1 1877 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 RANBP2P49792 3224 aaKnown RBP15.82■□□□□ 0.12
CPSF4-210ENST00000469897 TSPY3P0CV98 308 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 TSPY8P0CW00 308 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 MX1P20591 662 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 COPB2P35606 906 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 RRP1P56182 461 aaKnown RBP15.82■□□□□ 0.12
CPSF4-210ENST00000469897 LRRC41Q15345 812 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 SNRNP48Q6IEG0 339 aaKnown RBP15.82■□□□□ 0.12
CPSF4-210ENST00000469897 CCDC129Q6ZRS4 1044 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 NEDD1Q8NHV4 660 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 CHMP4CQ96CF2 233 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 CRBNQ96SW2 442 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 TEX13BQ9BXU2 312 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 NAPBQ9H115 298 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 RAVER2Q9HCJ3 691 aaKnown RBP15.82■□□□□ 0.12
CPSF4-210ENST00000469897 INCENPQ9NQS7 918 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 CTDP1Q9Y5B0 961 aaPredicted RBP15.82■□□□□ 0.12
CPSF4-210ENST00000469897 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
CPSF4-210ENST00000469897 TTLL1O95922 423 aa15.81■□□□□ 0.12
CPSF4-210ENST00000469897 SLC3A2P08195 630 aaKnown RBP15.81■□□□□ 0.12
CPSF4-210ENST00000469897 PDE4BQ07343 736 aa15.81■□□□□ 0.12
CPSF4-210ENST00000469897 PPARAQ07869 468 aa15.81■□□□□ 0.12
CPSF4-210ENST00000469897 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
CPSF4-210ENST00000469897 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
CPSF4-210ENST00000469897 TRIOBPQ9H2D6 2365 aa15.81■□□□□ 0.12
CPSF4-210ENST00000469897 XPNPEP3Q9NQH7 507 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms