RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF804AQ7Z570 1209 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 REXO1L1PQ8IX06 675 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.18
USP11-206ENST00000469080 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
USP11-206ENST00000469080 KIF3CO14782 793 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 BRAPQ7Z569 592 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 PNMA1Q8ND90 353 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 NOC3LQ8WTT2 800 aaKnown RBP13.9□□□□□ -0.18
USP11-206ENST00000469080 EXOC4Q96A65 974 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 PDE6BP35913 854 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 SLC16A2P36021 539 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 CCT6AP40227 531 aaKnown RBP13.89□□□□□ -0.19
USP11-206ENST00000469080 CORO7P57737 925 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 GPSM2P81274 684 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 CSRNP2Q9H175 543 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 DEXIO95424 95 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 ENOX2Q16206 610 aaKnown RBP13.89□□□□□ -0.19
USP11-206ENST00000469080 AP1ARQ63HQ0 302 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 OTUD6BQ8N6M0 293 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 NSUN4Q96CB9 384 aaKnown RBP13.89□□□□□ -0.19
USP11-206ENST00000469080 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
USP11-206ENST00000469080 NAPAP54920 295 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 INF2Q27J81 1249 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 EARS2Q5JPH6 523 aaKnown RBP13.89□□□□□ -0.19
USP11-206ENST00000469080 TADA2BQ86TJ2 420 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 ANKRD2Q9GZV1 360 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 FANCLQ9NW38 375 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 RTEL1Q9NZ71 1219 aa13.89□□□□□ -0.19
USP11-206ENST00000469080 THRAP3Q9Y2W1 955 aaKnown RBP13.89□□□□□ -0.19
USP11-206ENST00000469080 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 SFPQP23246 707 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP11-206ENST00000469080 KRT2P35908 639 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 SHC4Q6S5L8 630 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 COL18A1P39060 1754 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 KLHL33A6NCF5 533 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 PP2D1A8MPX8 630 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 RDXP35241 583 aaKnown RBP13.88□□□□□ -0.19
USP11-206ENST00000469080 SOGA3Q5TF21 947 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 PRR5LQ6MZQ0 368 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP11-206ENST00000469080 PAIP2Q9BPZ3 127 aaKnown RBP13.88□□□□□ -0.19
USP11-206ENST00000469080 SRRTQ9BXP5 876 aaKnown RBP13.88□□□□□ -0.19
USP11-206ENST00000469080 NUCKS1Q9H1E3 243 aaKnown RBP13.88□□□□□ -0.19
USP11-206ENST00000469080 EPC1Q9H2F5 836 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 ERLIN2O94905 339 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 IDEP14735 1019 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 PTGDRQ13258 359 aa13.88□□□□□ -0.19
USP11-206ENST00000469080 CTAGE5O15320 804 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 SNW1Q13573 536 aaKnown RBP13.87□□□□□ -0.19
USP11-206ENST00000469080 SLC39A14Q15043 492 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 ITFG2Q969R8 447 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 BIN2Q9UBW5 565 aaPredicted RBP13.87□□□□□ -0.19
USP11-206ENST00000469080 MRC1P22897 1456 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 FRMD3A2A2Y4 597 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 N4BP2L2Q92802 583 aaPredicted RBP13.87□□□□□ -0.19
USP11-206ENST00000469080 KCNQ5Q9NR82 932 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
USP11-206ENST00000469080 ELP1O95163 1332 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 MMP10P09238 476 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 CLEC4GQ6UXB4 293 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 EFCAB13Q8IY85 973 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 FMR1NBQ8N0W7 255 aaPredicted RBP13.87□□□□□ -0.19
USP11-206ENST00000469080 GJA10Q969M2 543 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 MIEF2Q96C03 454 aa13.87□□□□□ -0.19
USP11-206ENST00000469080 HOOK1Q9UJC3 728 aaKnown RBP13.87□□□□□ -0.19
USP11-206ENST00000469080 TAF1P21675 1872 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 TNNI2P48788 182 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 ADKP55263 362 aaKnown RBP13.86□□□□□ -0.19
USP11-206ENST00000469080 FBXW10Q5XX13 1052 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 PRDM16Q9HAZ2 1276 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 TOP1P11387 765 aaKnown RBP13.86□□□□□ -0.19
USP11-206ENST00000469080 NF2P35240 595 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 ARMC3Q5W041 872 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 SPTY2D1Q68D10 685 aaPredicted RBP13.86□□□□□ -0.19
USP11-206ENST00000469080 DPP8Q6V1X1 898 aaPredicted RBP13.86□□□□□ -0.19
USP11-206ENST00000469080 TMTC2Q8N394 836 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
USP11-206ENST00000469080 COA7Q96BR5 231 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 EYA3Q99504 573 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 PCDHAC2Q9Y5I4 1007 aa13.86□□□□□ -0.19
USP11-206ENST00000469080 IPO7O95373 1038 aaKnown RBP13.85□□□□□ -0.19
USP11-206ENST00000469080 MMP1P03956 469 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 CHRNA5P30532 468 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 HNRNPH1P31943 449 aaKnown RBP13.85□□□□□ -0.19
USP11-206ENST00000469080 PSMD2Q13200 908 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 RRAGBQ5VZM2 374 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 KRT27Q7Z3Y8 459 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 SPICE1Q8N0Z3 855 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 NFE2L3Q9Y4A8 694 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 PCNTO95613 3336 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 TMEM232C9JQI7 657 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 WNT7AO00755 349 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 SASH3O75995 380 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 IFNAR1P17181 557 aa13.85□□□□□ -0.19
USP11-206ENST00000469080 KARSQ15046 597 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms