RNA–Protein interactions for RNA: ENST00000466913.1

MUC1-215, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 177 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-215ENST00000466913 PTPN11Q06124 597 aaPredicted RBP4.24□□□□□ -1.73
MUC1-215ENST00000466913 IKZF1Q13422 519 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 SFRP5Q5T4F7 317 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 SPRED2Q7Z698 418 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 PI4K2BQ8TCG2 481 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 HEXIM2Q96MH2 286 aaKnown RBP4.24□□□□□ -1.73
MUC1-215ENST00000466913 VTI1BQ9UEU0 232 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 PCDHB5Q9Y5E4 795 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 SLIT1O75093 1534 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 CPS1P31327 1500 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 ALKQ9UM73 1620 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 MED14O60244 1454 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 ARHGAP23Q9P227 1491 aa4.24□□□□□ -1.73
MUC1-215ENST00000466913 KDM5AP29375 1690 aaKnown RBP4.23□□□□□ -1.73
MUC1-215ENST00000466913 NOS1P29475 1434 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 EOMESO95936 686 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 CST3P01034 146 aaPredicted RBP4.23□□□□□ -1.73
MUC1-215ENST00000466913 PGRP06401 933 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 GRK4P32298 578 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 RPL6Q02878 288 aaKnown RBP4.23□□□□□ -1.73
MUC1-215ENST00000466913 PWP1Q13610 501 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 SLBPQ14493 270 aaKnown RBP eCLIP4.23□□□□□ -1.73
MUC1-215ENST00000466913 TSNAXIP1Q2TAA8 658 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 LETMD1Q6P1Q0 360 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 FBXO33Q7Z6M2 555 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 WFDC3Q8IUB2 231 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 SPACA3Q8IXA5 215 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 MFSD4AQ8N468 514 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 COX4I2Q96KJ9 171 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 FBRSQ9HAH7 460 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 GOLGA2P5Q9HBQ8 144 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 PLAGL2Q9UPG8 496 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 SPHKAPQ2M3C7 1700 aa4.23□□□□□ -1.73
MUC1-215ENST00000466913 RPRD2Q5VT52 1461 aaKnown RBP4.23□□□□□ -1.73
MUC1-215ENST00000466913 RRBP1Q9P2E9 1410 aaKnown RBP4.22□□□□□ -1.73
MUC1-215ENST00000466913 TMEM131LA2VDJ0 1609 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 RBAK-RBAKDNI3L0D1 243 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 SLITRK5O94991 958 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 TFE3P19532 575 aaPredicted RBP4.22□□□□□ -1.73
MUC1-215ENST00000466913 CD96P40200 585 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 ETV3P41162 512 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 NKG7Q16617 165 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 PRAMEF13Q5VWM6 474 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 SLC23A3Q6PIS1 610 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 C22orf34Q6ZV56 151 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 FAM214BQ7L5A3 538 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 GZF1Q9H116 711 aaPredicted RBP4.22□□□□□ -1.73
MUC1-215ENST00000466913 XIRP1Q702N8 1843 aaKnown RBP4.22□□□□□ -1.73
MUC1-215ENST00000466913 ROCK1Q13464 1354 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 NWD1Q149M9 1564 aa4.22□□□□□ -1.73
MUC1-215ENST00000466913 PITPNM2Q9BZ72 1349 aa4.21□□□□□ -1.73
MUC1-215ENST00000466913 LRRC7Q96NW7 1537 aa4.21□□□□□ -1.73
MUC1-215ENST00000466913 CLTCL1P53675 1640 aa4.21□□□□□ -1.73
MUC1-215ENST00000466913 PAPLNO95428 1278 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 RNASE1P07998 156 aaKnown RBP4.21□□□□□ -1.74
MUC1-215ENST00000466913 ZNF865P0CJ78 1059 aaPredicted RBP4.21□□□□□ -1.74
MUC1-215ENST00000466913 KIR3DL1P43629 444 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 CDK8P49336 464 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 ZP2Q05996 745 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 NKPD1Q17RQ9 610 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 SLC6A19Q695T7 634 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 ATG4DQ86TL0 474 aaPredicted RBP4.21□□□□□ -1.74
MUC1-215ENST00000466913 CCDC84Q86UT8 332 aaPredicted RBP4.21□□□□□ -1.74
MUC1-215ENST00000466913 ANKLE2Q86XL3 938 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 RELL1Q8IUW5 271 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 MRPL41Q8IXM3 137 aaKnown RBP4.21□□□□□ -1.74
MUC1-215ENST00000466913 PHC3Q8NDX5 983 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 XAGE3Q8WTP9 111 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 JARID2Q92833 1246 aaPredicted RBP4.21□□□□□ -1.74
MUC1-215ENST00000466913 TMEM87BQ96K49 555 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 FAM161BQ96MY7 647 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 ADAM30Q9UKF2 790 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 TLR6Q9Y2C9 796 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 USP31Q70CQ4 1352 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 TMEM2Q9UHN6 1383 aa4.21□□□□□ -1.74
MUC1-215ENST00000466913 GFRA2O00451 464 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 CTSHP09668 335 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 YBX3P16989 372 aaKnown RBP eCLIP4.2□□□□□ -1.74
MUC1-215ENST00000466913 PLCG1P19174 1290 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 LMNB2Q03252 620 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 CDKAL1Q5VV42 579 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 THEMISQ8N1K5 641 aaPredicted RBP4.2□□□□□ -1.74
MUC1-215ENST00000466913 LRRN4CLQ8ND94 238 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 FAM168AQ92567 244 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 CCDC120Q96HB5 630 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 MBNL3Q9NUK0 354 aaKnown RBP4.2□□□□□ -1.74
MUC1-215ENST00000466913 ADAMTS6Q9UKP5 1117 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 TRPM2O94759 1503 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 ZFYVE9O95405 1425 aa4.2□□□□□ -1.74
MUC1-215ENST00000466913 MED1Q15648 1581 aaPredicted RBP4.19□□□□□ -1.74
MUC1-215ENST00000466913 NKTRP30414 1462 aaKnown RBP4.19□□□□□ -1.74
MUC1-215ENST00000466913 NUP155O75694 1391 aa4.19□□□□□ -1.74
MUC1-215ENST00000466913 H3BS24 57 aa4.19□□□□□ -1.74
MUC1-215ENST00000466913 CBX7O95931 251 aa4.19□□□□□ -1.74
MUC1-215ENST00000466913 LTKP29376 864 aa4.19□□□□□ -1.74
MUC1-215ENST00000466913 GBP2P32456 591 aaPredicted RBP4.19□□□□□ -1.74
MUC1-215ENST00000466913 YARSP54577 528 aaKnown RBP4.19□□□□□ -1.74
MUC1-215ENST00000466913 CAMK2GQ13555 558 aaPredicted RBP4.19□□□□□ -1.74
MUC1-215ENST00000466913 ZNF326Q5BKZ1 582 aaKnown RBP4.19□□□□□ -1.74
MUC1-215ENST00000466913 SNAP47Q5SQN1 464 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms