RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 ICA1Q05084 483 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 TRIM60Q495X7 471 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 C16orf86Q6ZW13 317 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 DNAJC2Q99543 621 aaKnown RBP15.96■□□□□ 0.15
SRRT-206ENST00000460194 ZNF214Q9UL59 606 aaPredicted RBP15.96■□□□□ 0.15
SRRT-206ENST00000460194 PHF24Q9UPV7 400 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 ATP11BQ9Y2G3 1177 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 ROBO3Q96MS0 1386 aa15.96■□□□□ 0.15
SRRT-206ENST00000460194 WDR46O15213 610 aaKnown RBP15.95■□□□□ 0.14
SRRT-206ENST00000460194 MBD4O95243 580 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 ATP5JP18859 108 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 ADCYAP1R1P41586 468 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 ZNF792Q3KQV3 632 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 NCAPG2Q86XI2 1143 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 BADQ92934 168 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 CCDC17Q96LX7 622 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 HAUS7Q99871 368 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 ARHGEF10LQ9HCE6 1279 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 FBXO28Q9NVF7 368 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 PAG1Q9NWQ8 432 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 NRBP1Q9UHY1 535 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 MCM3APO60318 1980 aa15.95■□□□□ 0.14
SRRT-206ENST00000460194 USP17L12C9JPN9 530 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 KBTBD13C9JR72 458 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 USP17L21D6R901 530 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 SLC25A27O95847 323 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 ZNF865P0CJ78 1059 aaPredicted RBP15.94■□□□□ 0.14
SRRT-206ENST00000460194 FCER1AP12319 257 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 EEF2P13639 858 aaKnown RBP15.94■□□□□ 0.14
SRRT-206ENST00000460194 TAL1P17542 331 aaPredicted RBP15.94■□□□□ 0.14
SRRT-206ENST00000460194 PLS1Q14651 629 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 UBE3CQ15386 1083 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 CTR9Q6PD62 1173 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 RIOX2Q8IUF8 465 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.94■□□□□ 0.14
SRRT-206ENST00000460194 FAM161BQ96MY7 647 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 TTYH1Q9H313 450 aaPredicted RBP15.94■□□□□ 0.14
SRRT-206ENST00000460194 BOLA2Q9H3K6 86 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 SLC5A4Q9NY91 659 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 DIS3Q9Y2L1 958 aaKnown RBP15.94■□□□□ 0.14
SRRT-206ENST00000460194 MYH4Q9Y623 1939 aa15.94■□□□□ 0.14
SRRT-206ENST00000460194 VWA5AO00534 786 aa15.93■□□□□ 0.14
SRRT-206ENST00000460194 RAB11FIP3O75154 756 aa15.93■□□□□ 0.14
SRRT-206ENST00000460194 PGK2P07205 417 aa15.93■□□□□ 0.14
SRRT-206ENST00000460194 IFIT2P09913 472 aaKnown RBP15.93■□□□□ 0.14
SRRT-206ENST00000460194 FERMT2Q96AC1 680 aa15.93■□□□□ 0.14
SRRT-206ENST00000460194 CDX2Q99626 313 aaPredicted RBP15.93■□□□□ 0.14
SRRT-206ENST00000460194 PUS7LQ9H0K6 701 aaKnown RBP15.93■□□□□ 0.14
SRRT-206ENST00000460194 SEMA6BQ9H3T3 888 aa15.93■□□□□ 0.14
SRRT-206ENST00000460194 PRKAG2Q9UGJ0 569 aa15.93■□□□□ 0.14
SRRT-206ENST00000460194 APBB1O00213 710 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 ADAMTS4O75173 837 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 EPHB4P54760 987 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 SMAD3P84022 425 aaKnown RBP15.92■□□□□ 0.14
SRRT-206ENST00000460194 TLE2Q04725 743 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 ZNF697Q5TEC3 545 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 TINF2Q9BSI4 451 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 SH2D4AQ9H788 454 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 KANSL2Q9H9L4 492 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
SRRT-206ENST00000460194 CCSAPQ6IQ19 270 aaPredicted RBP15.91■□□□□ 0.14
SRRT-206ENST00000460194 XPNPEP3Q9NQH7 507 aa15.91■□□□□ 0.14
SRRT-206ENST00000460194 DNAJC25-GNG10A0A024R161 153 aa15.9■□□□□ 0.14
SRRT-206ENST00000460194 KIAA0355O15063 1070 aa15.9■□□□□ 0.14
SRRT-206ENST00000460194 PGK1P00558 417 aa15.9■□□□□ 0.14
SRRT-206ENST00000460194 STAT3P40763 770 aa15.9■□□□□ 0.14
SRRT-206ENST00000460194 MIER1Q8N108 512 aa15.9■□□□□ 0.14
SRRT-206ENST00000460194 MMP19Q99542 508 aa15.9■□□□□ 0.14
SRRT-206ENST00000460194 PRDM5Q9NQX1 630 aaPredicted RBP15.9■□□□□ 0.14
SRRT-206ENST00000460194 COG6Q9Y2V7 657 aa15.9■□□□□ 0.14
SRRT-206ENST00000460194 A0A1W2PQ45 241 aaPredicted RBP15.89■□□□□ 0.13
SRRT-206ENST00000460194 A0A1W2PQY0 241 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 SNAI1O95863 264 aaPredicted RBP15.89■□□□□ 0.13
SRRT-206ENST00000460194 RARBP10826 455 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 RASA1P20936 1047 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 SBK1Q52WX2 424 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 FAM83BQ5T0W9 1011 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.89■□□□□ 0.13
SRRT-206ENST00000460194 ANKRD33Q7Z3H0 272 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 KLHDC9Q8NEP7 349 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 LENG1Q96BZ8 264 aaPredicted RBP15.89■□□□□ 0.13
SRRT-206ENST00000460194 FGD4Q96M96 766 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 STRBPQ96SI9 672 aaKnown RBP15.89■□□□□ 0.13
SRRT-206ENST00000460194 DDX19BQ9UMR2 479 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 RIPK3Q9Y572 518 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 TACC3Q9Y6A5 838 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 SLC4A4Q9Y6R1 1079 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 CHD9Q3L8U1 2897 aa15.89■□□□□ 0.13
SRRT-206ENST00000460194 IGKV6D-41A0A0C4DH26 115 aa15.88■□□□□ 0.13
SRRT-206ENST00000460194 GSG1L2A8MUP6 293 aa15.88■□□□□ 0.13
SRRT-206ENST00000460194 ATP2A1O14983 1001 aa15.88■□□□□ 0.13
SRRT-206ENST00000460194 HMMRO75330 724 aa15.88■□□□□ 0.13
SRRT-206ENST00000460194 CLTBP09497 229 aa15.88■□□□□ 0.13
SRRT-206ENST00000460194 FAAP100Q0VG06 881 aa15.88■□□□□ 0.13
SRRT-206ENST00000460194 KCTD2Q14681 263 aa15.88■□□□□ 0.13
SRRT-206ENST00000460194 TOX2Q96NM4 488 aa15.88■□□□□ 0.13
SRRT-206ENST00000460194 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
SRRT-206ENST00000460194 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.88■□□□□ 0.133e-7■■■□□ 14.6
SRRT-206ENST00000460194 MUC3AQ02505 3323 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms