RNA–Protein interactions for RNA: ENST00000459235.1

snoU13.28-201, humanhuman

BASIC

Gene snoU13, Length 104 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
snoU13.28-201ENST00000459235 LAS1LQ9Y4W2 734 aaKnown RBP3.84□□□□□ -1.79
snoU13.28-201ENST00000459235 TNPO3Q9Y5L0 923 aaKnown RBP3.84□□□□□ -1.79
snoU13.28-201ENST00000459235 TNKSO95271 1327 aa3.84□□□□□ -1.79
snoU13.28-201ENST00000459235 SYNGAP1Q96PV0 1343 aa3.84□□□□□ -1.79
snoU13.28-201ENST00000459235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 SPDYE3A6NKU9 549 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 VSTM5A8MXK1 200 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 NEMP1O14524 444 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 TBX3O15119 743 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 KPNA6O60684 536 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 SIN3BO75182 1162 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 CLEC3AO75596 197 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 CPP00450 1065 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 CFBP00751 764 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 EPHX1P07099 455 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 C6orf222P0C671 652 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 COL6A1P12109 1028 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 SELPP16109 830 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 HOXC12P31275 282 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 GBP1P32455 592 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 CDK8P49336 464 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 ETF1P62495 437 aaKnown RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 PIP4K2BP78356 416 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 PRR20EP86478 221 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 PRR20CP86479 221 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 PRR20DP86480 221 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 PRR20BP86481 221 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 PRR20AP86496 221 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 GSTM4Q03013 218 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 MLLT1Q03111 559 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 MAP4K2Q12851 820 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 GBX1Q14549 363 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 KRT72Q14CN4 511 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 SETDB1Q15047 1291 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 SAFBQ15424 915 aaKnown RBP eCLIP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 MAPRE1Q15691 268 aaKnown RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 KIF4BQ2VIQ3 1234 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 FOXD4L6Q3SYB3 417 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 INO80DQ53TQ3 878 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 ELMSAN1Q6PJG2 1045 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 FOXD4L3Q6VB84 417 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 MPRIPQ6WCQ1 1025 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 LHFPL2Q6ZUX7 228 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 ADAT2Q7Z6V5 191 aaKnown RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 DDX53Q86TM3 631 aaKnown RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 FAM35AQ86V20 835 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 PHACTR4Q8IZ21 702 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 KCT2Q8NC54 265 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 FAM13CQ8NE31 585 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 ACSF2Q96CM8 615 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 MRGPRX3Q96LB0 322 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 SLC6A18Q96N87 628 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 STRBPQ96SI9 672 aaKnown RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 NUP88Q99567 741 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 ELAC2Q9BQ52 826 aaKnown RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 HERPUD2Q9BSE4 406 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 TRIM8Q9BZR9 551 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 UBE2OQ9C0C9 1292 aaKnown RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 WNT10AQ9GZT5 417 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 KLHL25Q9H0H3 589 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 IGFLR1Q9H665 355 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 WHRNQ9P202 907 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 IP6K2Q9UHH9 426 aa3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 GDF2Q9UK05 429 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 FBXO9Q9UK97 447 aaPredicted RBP3.83□□□□□ -1.8
snoU13.28-201ENST00000459235 FANCGO15287 622 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 DNAJA2O60884 412 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 TCEA3O75764 348 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 TP53P04637 393 aaPredicted RBP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 MYL3P08590 195 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 GRK4P32298 578 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 ZNF280AP59817 542 aaPredicted RBP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 RING1Q06587 406 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 C19orf57Q0VDD7 668 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 TCIRG1Q13488 830 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 SEPT7Q16181 437 aaKnown RBP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 PTPN21Q16825 1174 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 GPR158Q5T848 1215 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 ZCCHC8Q6NZY4 707 aaKnown RBP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 TOGARAM2Q6ZUX3 1019 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 HID1Q8IV36 788 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 TRIM59Q8IWR1 403 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 MRPL41Q8IXM3 137 aaKnown RBP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 CCDC144CPQ8IYA2 1237 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 CPA6Q8N4T0 437 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 ZNF513Q8N8E2 541 aaPredicted RBP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 MYRIPQ8NFW9 859 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 USP33Q8TEY7 942 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 TNFRSF25Q93038 417 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 CLIP3Q96DZ5 547 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 FUBP3Q96I24 572 aaKnown RBP eCLIP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 AIFM3Q96NN9 605 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 JADE2Q9NQC1 790 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 AKT3Q9Y243 479 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 ZKSCAN5Q9Y2L8 839 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 LUC7L2Q9Y383 392 aaKnown RBP3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 MRFAP1Q9Y605 127 aa3.82□□□□□ -1.8
snoU13.28-201ENST00000459235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.81□□□□□ -1.8
snoU13.28-201ENST00000459235 TCRBV16S1A1N1A0A5B0 115 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms