RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 CRKP46108 304 aa17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 TPM4P67936 248 aa17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 RESP18Q5W5W9 173 aa17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 CDC42EP5Q6NZY7 148 aa17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 SPICE1Q8N0Z3 855 aa17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 XPO4Q9C0E2 1151 aaKnown RBP17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 ATF5Q9Y2D1 282 aaPredicted RBP17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 SERPINB13Q9UIV8 391 aa17.41■□□□□ 0.38
GTF2IRD1-203ENST00000455841 POSTNQ15063 836 aa17.4■□□□□ 0.38
GTF2IRD1-203ENST00000455841 AKT1S1Q96B36 256 aa17.4■□□□□ 0.38
GTF2IRD1-203ENST00000455841 TMEM260Q9NX78 707 aa17.4■□□□□ 0.38
GTF2IRD1-203ENST00000455841 THSD7AQ9UPZ6 1657 aa17.4■□□□□ 0.38
GTF2IRD1-203ENST00000455841 PTPREP23469 700 aa17.4■□□□□ 0.38
GTF2IRD1-203ENST00000455841 ZNF277Q9NRM2 450 aaPredicted RBP17.4■□□□□ 0.38
GTF2IRD1-203ENST00000455841 MKRN1Q9UHC7 482 aaKnown RBP17.4■□□□□ 0.38
GTF2IRD1-203ENST00000455841 MAD2L2Q9UI95 211 aa17.4■□□□□ 0.38
GTF2IRD1-203ENST00000455841 SMCO2A6NFE2 343 aa17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 HLA-DOAP06340 250 aa17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 TNNI2P48788 182 aa17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 NLRP12P59046 1061 aa17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 PFKFB3Q16875 520 aaPredicted RBP17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 TPD52L1Q16890 204 aaPredicted RBP17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 RBM43Q6ZSC3 357 aaKnown RBP17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 DGKHQ86XP1 1220 aa17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 CACTINQ8WUQ7 758 aaKnown RBP17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 FANCLQ9NW38 375 aa17.39■□□□□ 0.38
GTF2IRD1-203ENST00000455841 A0A087X0B3 334 aa17.39■□□□□ 0.37
GTF2IRD1-203ENST00000455841 PPP4CP60510 307 aa17.39■□□□□ 0.37
GTF2IRD1-203ENST00000455841 KARSQ15046 597 aaKnown RBP17.39■□□□□ 0.37
GTF2IRD1-203ENST00000455841 GJA10Q969M2 543 aa17.39■□□□□ 0.37
GTF2IRD1-203ENST00000455841 NUP88Q99567 741 aaPredicted RBP17.39■□□□□ 0.37
GTF2IRD1-203ENST00000455841 TAF1LQ8IZX4 1826 aa17.39■□□□□ 0.37
GTF2IRD1-203ENST00000455841 SLC35G1Q2M3R5 365 aa17.39■□□□□ 0.37
GTF2IRD1-203ENST00000455841 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 HOOK1Q9UJC3 728 aaKnown RBP17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 BRWD3Q6RI45 1802 aa17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 SBF2Q86WG5 1849 aa17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 DOCK2Q92608 1830 aa17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 CCNT1O60563 726 aaKnown RBP17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 PCP11498 1178 aaKnown RBP17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 SLC15A2Q16348 729 aa17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
GTF2IRD1-203ENST00000455841 MYH6P13533 1939 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 UBE2SQ16763 222 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 CPLX3Q8WVH0 158 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 ARAP2Q8WZ64 1704 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 PLSCR1O15162 318 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 ERCC3P19447 782 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 PODXL2Q9NZ53 605 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 CCDC84Q86UT8 332 aaPredicted RBP17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 FAM177A1Q8N128 213 aaPredicted RBP17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 TMX1Q9H3N1 280 aa17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.37■□□□□ 0.37
GTF2IRD1-203ENST00000455841 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 RREB1Q92766 1687 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 DDTLA6NHG4 134 aaPredicted RBP17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 RGL2O15211 777 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 C16orf86Q6ZW13 317 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 DPF2Q92785 391 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 SRPRBQ9Y5M8 271 aaKnown RBP17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 UBASH3AP57075 661 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 PPP2R5BQ15173 497 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 USH1GQ495M9 461 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 HS1BP3Q53T59 392 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 TMEM60Q9H2L4 133 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 GRM4Q14833 912 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 ZFP91Q96JP5 570 aaPredicted RBP17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 MAN1B1Q9UKM7 699 aa17.36■□□□□ 0.37
GTF2IRD1-203ENST00000455841 SSBP05455 408 aaKnown RBP eCLIP17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 TOP1P11387 765 aaKnown RBP17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 UBA7P41226 1012 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 TXKP42681 527 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 GNAQP50148 359 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 FANCCQ00597 558 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 NPY5RQ15761 445 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 MIGA2Q7L4E1 593 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 NEDD1Q8NHV4 660 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 NFE2L3Q9Y4A8 694 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 CALML3P27482 149 aa17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 PDS5AQ29RF7 1337 aaKnown RBP17.35■□□□□ 0.37
GTF2IRD1-203ENST00000455841 FGRP09769 529 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 SKILP12757 684 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 SEPT2Q15019 361 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 APOBEC3HQ6NTF7 200 aaKnown RBP17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 HPSEQ9Y251 543 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 UQCRHLA0A096LP55 91 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 TMEM232C9JQI7 657 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 OFD1O75665 1012 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 UQCRHP07919 91 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 STAT6P42226 847 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 CCDC88AQ3V6T2 1871 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 PCDHA4Q9UN74 947 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 BMP6P22004 513 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 TECP42680 631 aa17.34■□□□□ 0.37
GTF2IRD1-203ENST00000455841 MYL5Q02045 173 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms