RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.53■■□□□ 1.2
MSH6-206ENST00000455383 BADQ92934 168 aa22.53■■□□□ 1.2
MSH6-206ENST00000455383 FAM161BQ96MY7 647 aa22.53■■□□□ 1.2
MSH6-206ENST00000455383 COL25A1Q9BXS0 654 aaPredicted RBP22.53■■□□□ 1.2
MSH6-206ENST00000455383 PHF24Q9UPV7 400 aa22.53■■□□□ 1.2
MSH6-206ENST00000455383 DIS3Q9Y2L1 958 aaKnown RBP22.53■■□□□ 1.2
MSH6-206ENST00000455383 ZBED9Q6R2W3 1325 aa22.53■■□□□ 1.2
MSH6-206ENST00000455383 ROBO3Q96MS0 1386 aa22.52■■□□□ 1.2
MSH6-206ENST00000455383 CYP2D7A0A087X1C5 515 aa22.52■■□□□ 1.2
MSH6-206ENST00000455383 TRIM43BA6NCK2 446 aa22.52■■□□□ 1.2
MSH6-206ENST00000455383 RAB11FIP3O75154 756 aa22.52■■□□□ 1.2
MSH6-206ENST00000455383 ATP5JP18859 108 aa22.52■■□□□ 1.2
MSH6-206ENST00000455383 UBE3CQ15386 1083 aa22.52■■□□□ 1.2
MSH6-206ENST00000455383 SH3RF1Q7Z6J0 888 aa22.52■■□□□ 1.2
MSH6-206ENST00000455383 TRIM43Q96BQ3 446 aaPredicted RBP22.52■■□□□ 1.2
MSH6-206ENST00000455383 ZNFX1Q9P2E3 1918 aaKnown RBP22.52■■□□□ 1.2
MSH6-206ENST00000455383 BAZ2AQ9UIF9 1905 aaKnown RBP22.52■■□□□ 1.2
MSH6-206ENST00000455383 USP17L12C9JPN9 530 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 USP17L21D6R901 530 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 APBB1O00213 710 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 HMMRO75330 724 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 EEF2P13639 858 aaKnown RBP22.51■■□□□ 1.19
MSH6-206ENST00000455383 ZNF792Q3KQV3 632 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 REPS2Q8NFH8 660 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 FERMT2Q96AC1 680 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 HAUS7Q99871 368 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 BOLA2Q9H3K6 86 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 KANSL2Q9H9L4 492 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 PRDM5Q9NQX1 630 aaPredicted RBP22.51■■□□□ 1.19
MSH6-206ENST00000455383 ZBTB40Q9NUA8 1239 aa22.51■■□□□ 1.19
MSH6-206ENST00000455383 CHGBP05060 677 aa22.5■■□□□ 1.19
MSH6-206ENST00000455383 SMAD3P84022 425 aaKnown RBP22.5■■□□□ 1.19
MSH6-206ENST00000455383 MMP19Q99542 508 aa22.5■■□□□ 1.19
MSH6-206ENST00000455383 CDX2Q99626 313 aaPredicted RBP22.5■■□□□ 1.19
MSH6-206ENST00000455383 TINF2Q9BSI4 451 aa22.5■■□□□ 1.19
MSH6-206ENST00000455383 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.5■■□□□ 1.19
MSH6-206ENST00000455383 SEMA6BQ9H3T3 888 aa22.5■■□□□ 1.19
MSH6-206ENST00000455383 XPNPEP3Q9NQH7 507 aa22.5■■□□□ 1.19
MSH6-206ENST00000455383 FBXO28Q9NVF7 368 aa22.5■■□□□ 1.19
MSH6-206ENST00000455383 ZNF214Q9UL59 606 aaPredicted RBP22.5■■□□□ 1.19
MSH6-206ENST00000455383 PPP1R9AQ9ULJ8 1098 aa22.5■■□□□ 1.19
MSH6-206ENST00000455383 SMCHD1A6NHR9 2005 aa22.5■■□□□ 1.19
MSH6-206ENST00000455383 COL11A1P12107 1806 aaPredicted RBP22.5■■□□□ 1.19
MSH6-206ENST00000455383 VWA5AO00534 786 aa22.49■■□□□ 1.19
MSH6-206ENST00000455383 MYCNP04198 464 aaPredicted RBP22.49■■□□□ 1.19
MSH6-206ENST00000455383 ZNF865P0CJ78 1059 aaPredicted RBP22.49■■□□□ 1.19
MSH6-206ENST00000455383 RARBP10826 455 aa22.49■■□□□ 1.19
MSH6-206ENST00000455383 MS4A1P11836 297 aa22.49■■□□□ 1.19
MSH6-206ENST00000455383 TLE2Q04725 743 aa22.49■■□□□ 1.19
MSH6-206ENST00000455383 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.49■■□□□ 1.19
MSH6-206ENST00000455383 PGK2P07205 417 aa22.48■■□□□ 1.19
MSH6-206ENST00000455383 ITGB8P26012 769 aa22.48■■□□□ 1.19
MSH6-206ENST00000455383 STAT3P40763 770 aa22.48■■□□□ 1.19
MSH6-206ENST00000455383 CTR9Q6PD62 1173 aa22.48■■□□□ 1.19
MSH6-206ENST00000455383 AMOTL1Q8IY63 956 aa22.48■■□□□ 1.19
MSH6-206ENST00000455383 DDX19BQ9UMR2 479 aa22.48■■□□□ 1.19
MSH6-206ENST00000455383 TACC3Q9Y6A5 838 aa22.48■■□□□ 1.19
MSH6-206ENST00000455383 TAL1P17542 331 aaPredicted RBP22.47■■□□□ 1.19
MSH6-206ENST00000455383 COPB2P35606 906 aa22.47■■□□□ 1.19
MSH6-206ENST00000455383 KCTD2Q14681 263 aa22.47■■□□□ 1.19
MSH6-206ENST00000455383 SAMD1Q6SPF0 538 aaPredicted RBP22.47■■□□□ 1.19
MSH6-206ENST00000455383 RNF180Q86T96 592 aa22.47■■□□□ 1.19
MSH6-206ENST00000455383 TTYH1Q9H313 450 aaPredicted RBP22.47■■□□□ 1.19
MSH6-206ENST00000455383 GOPCQ9HD26 462 aa22.47■■□□□ 1.19
MSH6-206ENST00000455383 GREB1LQ9C091 1923 aaPredicted RBP22.47■■□□□ 1.19
MSH6-206ENST00000455383 KIAA0355O15063 1070 aa22.46■■□□□ 1.19
MSH6-206ENST00000455383 PGK1P00558 417 aa22.46■■□□□ 1.19
MSH6-206ENST00000455383 FAM83BQ5T0W9 1011 aa22.46■■□□□ 1.19
MSH6-206ENST00000455383 SLC4A4Q9Y6R1 1079 aa22.46■■□□□ 1.19
MSH6-206ENST00000455383 PLXNA1Q9UIW2 1896 aa22.45■■□□□ 1.19
MSH6-206ENST00000455383 A0A1W2PQ45 241 aaPredicted RBP22.45■■□□□ 1.18
MSH6-206ENST00000455383 A0A1W2PQY0 241 aa22.45■■□□□ 1.18
MSH6-206ENST00000455383 ADAMTS4O75173 837 aa22.45■■□□□ 1.18
MSH6-206ENST00000455383 CLTBP09497 229 aa22.45■■□□□ 1.18
MSH6-206ENST00000455383 AKR1A1P14550 325 aa22.45■■□□□ 1.18
MSH6-206ENST00000455383 MSL3Q8N5Y2 521 aaKnown RBP22.45■■□□□ 1.18
MSH6-206ENST00000455383 DDRGK1Q96HY6 314 aa22.45■■□□□ 1.18
MSH6-206ENST00000455383 TSEN34Q9BSV6 310 aaKnown RBP22.45■■□□□ 1.18
MSH6-206ENST00000455383 PUS7LQ9H0K6 701 aaKnown RBP22.45■■□□□ 1.18
MSH6-206ENST00000455383 MYH7P12883 1935 aa22.45■■□□□ 1.18
MSH6-206ENST00000455383 EYSQ5T1H1 3165 aa22.44■■□□□ 1.18
MSH6-206ENST00000455383 EPHB4P54760 987 aa22.44■■□□□ 1.18
MSH6-206ENST00000455383 SBK1Q52WX2 424 aa22.44■■□□□ 1.18
MSH6-206ENST00000455383 ARPP21Q9UBL0 812 aaPredicted RBP22.44■■□□□ 1.18
MSH6-206ENST00000455383 COG6Q9Y2V7 657 aa22.44■■□□□ 1.18
MSH6-206ENST00000455383 CDH23Q9H251 3354 aa22.44■■□□□ 1.18
MSH6-206ENST00000455383 ZSCAN25Q6NSZ9 544 aa22.43■■□□□ 1.18
MSH6-206ENST00000455383 ANKRD33Q7Z3H0 272 aa22.43■■□□□ 1.18
MSH6-206ENST00000455383 SYNGAP1Q96PV0 1343 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 DNAJC25-GNG10A0A024R161 153 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 TMEM265A0A087WTH1 108 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 MAMDC4Q6UXC1 1216 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 KLHDC9Q8NEP7 349 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 MAFAQ8NHW3 353 aaPredicted RBP22.42■■□□□ 1.18
MSH6-206ENST00000455383 LENG1Q96BZ8 264 aaPredicted RBP22.42■■□□□ 1.18
MSH6-206ENST00000455383 TOX2Q96NM4 488 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 STRBPQ96SI9 672 aaKnown RBP22.42■■□□□ 1.18
MSH6-206ENST00000455383 SLF1Q9BQI6 1058 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 TEX13BQ9BXU2 312 aa22.42■■□□□ 1.18
MSH6-206ENST00000455383 BCL11AQ9H165 835 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms