RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 KRT40Q6A162 431 aa15.5■□□□□ 0.07
AC004540.1-204ENST00000449537 GJD3Q8N144 294 aa15.5■□□□□ 0.07
AC004540.1-204ENST00000449537 AATFQ9NY61 560 aaKnown RBP eCLIP15.5■□□□□ 0.07
AC004540.1-204ENST00000449537 SIPA1L1O43166 1804 aa15.5■□□□□ 0.07
AC004540.1-204ENST00000449537 MVPQ14764 893 aaKnown RBP15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 TMEM67Q5HYA8 995 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 CCSAPQ6IQ19 270 aaPredicted RBP15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 MB21D1Q8N884 522 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 SPATA5Q8NB90 893 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 LENG1Q96BZ8 264 aaPredicted RBP15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 XAGE2Q96GT9 111 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 CERS4Q9HA82 394 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 HMG20BQ9P0W2 317 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 LRP2BPQ9P2M1 347 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 SAP30BPQ9UHR5 308 aaKnown RBP15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 CNPY2Q9Y2B0 182 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 CACNA1AO00555 2505 aa15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 ZNFX1Q9P2E3 1918 aaKnown RBP15.49■□□□□ 0.07
AC004540.1-204ENST00000449537 FLT1P17948 1338 aa15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 SYNRGQ9UMZ2 1314 aa15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 A0A0U1RQG5 324 aaPredicted RBP15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 PPP4CP60510 307 aa15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 FOXK2Q01167 660 aa15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 DDX10Q13206 875 aaKnown RBP15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 FAM126BQ8IXS8 530 aa15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 RPUSD2Q8IZ73 545 aaKnown RBP15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 PCSK9Q8NBP7 692 aaKnown RBP15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 CDCA7LQ96GN5 454 aa15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 CABP5Q9NP86 173 aa15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 FAM184BQ9ULE4 1060 aa15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 DIS3Q9Y2L1 958 aaKnown RBP15.48■□□□□ 0.07
AC004540.1-204ENST00000449537 ST18O60284 1047 aa15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 ATP2A2P16615 1042 aaKnown RBP15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 SSTR3P32745 418 aaPredicted RBP15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 ABCB5Q2M3G0 1257 aa15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 TATDN1Q6P1N9 297 aa15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 WDR63Q8IWG1 891 aa15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 FAM178BQ8IXR5 827 aa15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 AKAP2Q9Y2D5 859 aa15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 ROBO3Q96MS0 1386 aa15.47■□□□□ 0.07
AC004540.1-204ENST00000449537 A0A1B0GUL7 405 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 ZBBXA8MT70 800 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 PGK2P07205 417 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 ASGR1P07306 291 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 CA3P07451 260 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 CERKLQ49MI3 558 aaPredicted RBP15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 NAA16Q6N069 864 aaPredicted RBP15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 PI16Q6UXB8 463 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 MMP19Q99542 508 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 TANGO6Q9C0B7 1094 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 HIPK3Q9H422 1215 aa15.46■□□□□ 0.07
AC004540.1-204ENST00000449537 EPOPA6NHQ4 379 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 DUSP11O75319 330 aaKnown RBP15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 SLC25A27O95847 323 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 CD4P01730 458 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 C6orf222P0C671 652 aaPredicted RBP15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 DSG3P32926 999 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 ZNF792Q3KQV3 632 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 GORABQ5T7V8 394 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 ARNTL2Q8WYA1 636 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 NEUROD6Q96NK8 337 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 SPC25Q9HBM1 224 aa15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 PA2G4Q9UQ80 394 aaKnown RBP15.45■□□□□ 0.06
AC004540.1-204ENST00000449537 TRANK1O15050 2925 aa15.44■□□□□ 0.06
AC004540.1-204ENST00000449537 MYADML2A6NDP7 307 aa15.44■□□□□ 0.06
AC004540.1-204ENST00000449537 CST5P28325 142 aaPredicted RBP15.44■□□□□ 0.06
AC004540.1-204ENST00000449537 CCL23P55773 120 aa15.44■□□□□ 0.06
AC004540.1-204ENST00000449537 KCTD2Q14681 263 aa15.44■□□□□ 0.06
AC004540.1-204ENST00000449537 GNASQ5JWF2 1037 aa15.44■□□□□ 0.06
AC004540.1-204ENST00000449537 SERPINB13Q9UIV8 391 aa15.44■□□□□ 0.06
AC004540.1-204ENST00000449537 CDK5RAP2Q96SN8 1893 aa15.44■□□□□ 0.06
AC004540.1-204ENST00000449537 PRKRIP1Q9H875 184 aaPredicted RBP15.43■□□□□ 0.06
AC004540.1-204ENST00000449537 SALL2Q9Y467 1007 aaPredicted RBP15.43■□□□□ 0.06
AC004540.1-204ENST00000449537 UMODL1Q5DID0 1318 aa15.43■□□□□ 0.06
AC004540.1-204ENST00000449537 DCXO43602 365 aa15.42■□□□□ 0.06
AC004540.1-204ENST00000449537 FLOT1O75955 427 aa15.42■□□□□ 0.06
AC004540.1-204ENST00000449537 IRX5P78411 483 aaPredicted RBP15.42■□□□□ 0.06
AC004540.1-204ENST00000449537 GRB10Q13322 594 aa15.42■□□□□ 0.06
AC004540.1-204ENST00000449537 COPRSQ9NQ92 184 aa15.42■□□□□ 0.06
AC004540.1-204ENST00000449537 BRWD1Q9NSI6 2320 aa15.42■□□□□ 0.06
AC004540.1-204ENST00000449537 TAP1Q03518 808 aa15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 TFCP2Q12800 502 aa15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 MSL3Q8N5Y2 521 aaKnown RBP15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 ATG4CQ96DT6 458 aa15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 MFSD14AQ96MC6 490 aa15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 PHOX2BQ99453 314 aa15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 ZHX1Q9UKY1 873 aaPredicted RBP15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 PTPRCP08575 1304 aa15.41■□□□□ 0.06
AC004540.1-204ENST00000449537 A0A1W2PRG0 241 aa15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 POTEB3A0JP26 581 aa15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 KIF28PB7ZC32 967 aa15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 SNAI1O95863 264 aaPredicted RBP15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 ARID4AP29374 1257 aaPredicted RBP15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 GUCY1A2P33402 732 aa15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 GJA9P57773 515 aa15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 TMEM132BQ14DG7 1078 aa15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 SEPT2Q15019 361 aa15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 LEXMQ3ZCV2 418 aa15.4■□□□□ 0.06
AC004540.1-204ENST00000449537 POTEBQ6S5H4 581 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms