RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SGPL1O95470 568 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 TFRCP02786 760 aaKnown RBP7□□□□□ -1.29
SDCBP-205ENST00000447267 GATA4P43694 442 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 MRPS5P82675 430 aaKnown RBP7□□□□□ -1.29
SDCBP-205ENST00000447267 RSPO4Q2I0M5 234 aaPredicted RBP7□□□□□ -1.29
SDCBP-205ENST00000447267 KIF4BQ2VIQ3 1234 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 NKAPLQ5M9Q1 402 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 COX20Q5RI15 118 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 KRT25Q7Z3Z0 450 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 JPH1Q9HDC5 661 aaPredicted RBP7□□□□□ -1.29
SDCBP-205ENST00000447267 KCNQ5Q9NR82 932 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 TPSG1Q9NRR2 321 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 BIN2Q9UBW5 565 aaPredicted RBP7□□□□□ -1.29
SDCBP-205ENST00000447267 BAHCC1Q9P281 2608 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 ZNF831Q5JPB2 1677 aa7□□□□□ -1.29
SDCBP-205ENST00000447267 ANKRD26Q9UPS8 1709 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.99□□□□□ -1.29
SDCBP-205ENST00000447267 A0A087WZG4 1122 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 A0A0A0MRY4 1105 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 CAMTA2O94983 1202 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 SELPP16109 830 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 INHBEP58166 350 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 ARHGEF6Q15052 776 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 MAP3K11Q16584 847 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 C11orf91Q3C1V1 193 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 FOXD4L6Q3SYB3 417 aaPredicted RBP6.99□□□□□ -1.29
SDCBP-205ENST00000447267 PRRT3Q5FWE3 981 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 SHISA2Q6UWI4 295 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 FOXD4L3Q6VB84 417 aaPredicted RBP6.99□□□□□ -1.29
SDCBP-205ENST00000447267 DPF2Q92785 391 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 FBXL18Q96ME1 805 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 PTPN18Q99952 460 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 LPIN3Q9BQK8 851 aa6.99□□□□□ -1.29
SDCBP-205ENST00000447267 ST20-MTHFSA0A0A6YYL1 179 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 PRMT3O60678 531 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 SASH3O75995 380 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 MAP3K6O95382 1288 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 MTHFSP49914 203 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 ARSDP51689 593 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 ETFBKMTQ8IXQ9 262 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 THEGQ9P2T0 379 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 KCNMB2Q9Y691 235 aa6.98□□□□□ -1.29
SDCBP-205ENST00000447267 RTL1A6NKG5 1358 aa6.97□□□□□ -1.29
SDCBP-205ENST00000447267 RAB3GAP2Q9H2M9 1393 aa6.97□□□□□ -1.29
SDCBP-205ENST00000447267 TNFRSF10BO14763 440 aa6.97□□□□□ -1.29
SDCBP-205ENST00000447267 GRK4P32298 578 aa6.97□□□□□ -1.29
SDCBP-205ENST00000447267 TRIM28Q13263 835 aaKnown RBP6.97□□□□□ -1.29
SDCBP-205ENST00000447267 CCDC85BQ15834 202 aaPredicted RBP6.97□□□□□ -1.29
SDCBP-205ENST00000447267 PERM1Q5SV97 790 aa6.97□□□□□ -1.29
SDCBP-205ENST00000447267 DHX32Q7L7V1 743 aaKnown RBP6.97□□□□□ -1.29
SDCBP-205ENST00000447267 PNMA5Q96PV4 448 aa6.97□□□□□ -1.29
SDCBP-205ENST00000447267 UIMC1Q96RL1 719 aa6.97□□□□□ -1.29
SDCBP-205ENST00000447267 TJP1Q07157 1748 aa6.96□□□□□ -1.29
SDCBP-205ENST00000447267 EDC4Q6P2E9 1401 aaKnown RBP6.96□□□□□ -1.3
SDCBP-205ENST00000447267 SPDYE3A6NKU9 549 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 HSP90AB1P08238 724 aaKnown RBP6.96□□□□□ -1.3
SDCBP-205ENST00000447267 CPB1P15086 417 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 ELOAQ14241 798 aaKnown RBP6.96□□□□□ -1.3
SDCBP-205ENST00000447267 TRIP4Q15650 581 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-205ENST00000447267 ZNF530Q6P9A1 599 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-205ENST00000447267 TPTE2Q6XPS3 522 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 NECAB2Q7Z6G3 386 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 FAM35AQ86V20 835 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 TREML1Q86YW5 311 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 DMRTC2Q8IXT2 367 aaPredicted RBP6.96□□□□□ -1.3
SDCBP-205ENST00000447267 CLMNQ96JQ2 1002 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 DEFB118Q96PH6 123 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 RALYQ9UKM9 306 aaKnown RBP6.96□□□□□ -1.3
SDCBP-205ENST00000447267 RIPOR2Q9Y4F9 1068 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 CACNA1BQ00975 2339 aa6.96□□□□□ -1.3
SDCBP-205ENST00000447267 POLR2AP24928 1970 aaKnown RBP6.95□□□□□ -1.3
SDCBP-205ENST00000447267 PPM1GO15355 546 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-205ENST00000447267 CTGFP29279 349 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 KIAA2012Q0VF49 1180 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 MBTPS1Q14703 1052 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 SWI5Q1ZZU3 235 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 LDLRAD1Q5T700 205 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 TMEM164Q5U3C3 297 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 OTUD7BQ6GQQ9 843 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 HFE2Q6ZVN8 426 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 RGL4Q8IZJ4 473 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 Q8N3U1 123 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 VTI1AQ96AJ9 217 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 WNK4Q96J92 1243 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 VPS33BQ9H267 617 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 GGNBP2Q9H3C7 697 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 ANGEL1Q9UNK9 670 aaKnown RBP6.95□□□□□ -1.3
SDCBP-205ENST00000447267 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 ARFGEF2Q9Y6D5 1785 aa6.95□□□□□ -1.3
SDCBP-205ENST00000447267 A1BGP04217 495 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 RARAP10276 462 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 TNNT2P45379 298 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-205ENST00000447267 GPLD1P80108 840 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 PDE3AQ14432 1141 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 ARMC9Q7Z3E5 817 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 FMR1NBQ8N0W7 255 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-205ENST00000447267 RAET1EQ8TD07 263 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 ANKS1AQ92625 1134 aa6.94□□□□□ -1.3
SDCBP-205ENST00000447267 RPGRQ92834 1020 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms