RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GRAMD1CQ8IYS0 662 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 ISCA1Q9BUE6 129 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 TRAPPC3LQ5T215 181 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 MAPKAPK5Q8IW41 473 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 TGFBRAP1Q8WUH2 860 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 PANX2Q96RD6 677 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 MTA3Q9BTC8 594 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 SAMSN1Q9NSI8 373 aaKnown RBP18.55■□□□□ 0.56
TCOF1-206ENST00000445265 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
TCOF1-206ENST00000445265 GOLGA6CA6NDK9 693 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 GOLGA6BA6NDN3 693 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 GOLGA6DP0CG33 693 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 IFT20Q8IY31 132 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 ZNF579Q8NAF0 562 aaKnown RBP18.55■□□□□ 0.56
TCOF1-206ENST00000445265 CTNNBL1Q8WYA6 563 aaPredicted RBP18.55■□□□□ 0.56
TCOF1-206ENST00000445265 GOLGA6AQ9NYA3 693 aa18.55■□□□□ 0.56
TCOF1-206ENST00000445265 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.55■□□□□ 0.568e-6■■■■■ 36.2
TCOF1-206ENST00000445265 SPATA31D1Q6ZQQ2 1576 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 OR52Z1P0C646 297 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 RBL2Q08999 1139 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 DYMQ7RTS9 669 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 TRIM28Q13263 835 aaKnown RBP18.54■□□□□ 0.56
TCOF1-206ENST00000445265 GGA1Q9UJY5 639 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 CDHR2Q9BYE9 1310 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 ALX1Q15699 326 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 USP37Q86T82 979 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 PIGBQ92521 554 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 CUEDC2Q9H467 287 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 SEC31BQ9NQW1 1179 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
TCOF1-206ENST00000445265 EEF1GP26641 437 aaKnown RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 DNAJC21Q5F1R6 531 aaKnown RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 RBM17Q96I25 401 aaKnown RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 FAM207AQ9NSI2 230 aaPredicted RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 ZEB2O60315 1214 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 CCDC174Q6PII3 467 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 STAG1Q8WVM7 1258 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 LAD1O00515 517 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 CLCN6P51797 869 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 C2CD5Q86YS7 1000 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 GIMAP7Q8NHV1 300 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 MKRN1Q9UHC7 482 aaKnown RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 DDX41Q9UJV9 622 aaKnown RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 CCDC151A5D8V7 595 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 EPB41P11171 864 aaKnown RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 RCAN1P53805 252 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 SIK1P57059 783 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 ZSCAN26Q16670 478 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 HERC4Q5GLZ8 1057 aaPredicted RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 DCAF17Q5H9S7 520 aaPredicted RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
TCOF1-206ENST00000445265 CYB5R4Q7L1T6 521 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 SLC35F6Q8N357 371 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 EYA3Q99504 573 aa18.53■□□□□ 0.56
TCOF1-206ENST00000445265 CRKLP46109 303 aaKnown RBP18.52■□□□□ 0.56
TCOF1-206ENST00000445265 ASIC2Q16515 512 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 NEK8Q86SG6 692 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 MICALL1Q8N3F8 863 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 OTUD6BQ8N6M0 293 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 PPFIA1Q13136 1202 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 CFAP221Q4G0U5 840 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 TYW1BQ6NUM6 668 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 RRAGAQ7L523 313 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 GPKOWQ92917 476 aaPredicted RBP eCLIP18.52■□□□□ 0.56
TCOF1-206ENST00000445265 CCNL1Q9UK58 526 aaPredicted RBP18.52■□□□□ 0.56
TCOF1-206ENST00000445265 KLRF2D3W0D1 207 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 MNAT1P51948 309 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 PTPN21Q16825 1174 aa18.52■□□□□ 0.56
TCOF1-206ENST00000445265 TBC1D22AQ8WUA7 517 aa18.52■□□□□ 0.55
TCOF1-206ENST00000445265 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.551e-6■■□□□ 12.3
TCOF1-206ENST00000445265 NT5C3AQ9H0P0 336 aa18.52■□□□□ 0.55
TCOF1-206ENST00000445265 MYL1P05976 194 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 ZNF658Q5TYW1 1059 aaPredicted RBP18.51■□□□□ 0.55
TCOF1-206ENST00000445265 CCDC26Q8TAB7 109 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 MED4Q9NPJ6 270 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 SGMS1Q86VZ5 419 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 SMYD4Q8IYR2 804 aaPredicted RBP18.51■□□□□ 0.55
TCOF1-206ENST00000445265 RWDD2AQ9UIY3 292 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 SFMBT2Q5VUG0 894 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 SND1Q7KZF4 910 aaKnown RBP eCLIP18.51■□□□□ 0.55
TCOF1-206ENST00000445265 STK24Q9Y6E0 443 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 TAF6LQ9Y6J9 622 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 RFX5P48382 616 aaPredicted RBP18.51■□□□□ 0.55
TCOF1-206ENST00000445265 LONRF2Q1L5Z9 754 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 TTC31Q49AM3 519 aaPredicted RBP18.51■□□□□ 0.55
TCOF1-206ENST00000445265 PAGE5Q96GU1 130 aa18.51■□□□□ 0.55
TCOF1-206ENST00000445265 PAK2Q13177 524 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 PPP4R3AQ6IN85 833 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 RETREG2Q8NC44 543 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 STMN4Q9H169 189 aaPredicted RBP18.5■□□□□ 0.55
TCOF1-206ENST00000445265 LY9Q9HBG7 655 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 ZNF219Q9P2Y4 722 aaPredicted RBP18.5■□□□□ 0.55
TCOF1-206ENST00000445265 SOS2Q07890 1332 aaPredicted RBP18.5■□□□□ 0.55
TCOF1-206ENST00000445265 PDIA6Q15084 440 aa18.5■□□□□ 0.55
TCOF1-206ENST00000445265 DHTKD1Q96HY7 919 aaPredicted RBP18.5■□□□□ 0.55
TCOF1-206ENST00000445265 PCDHA4Q9UN74 947 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms