RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CACTIN-AS1Q8N1I8 211 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 MICALL1Q8N3F8 863 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 NME8Q8N427 588 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 SMARCC1Q92922 1105 aaPredicted RBP6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 TNFRSF25Q93038 417 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 ELMO3Q96BJ8 720 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 WDR89Q96FK6 387 aaPredicted RBP6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 ZFP42Q96MM3 310 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 IGFLR1Q9H665 355 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 TJP2Q9UDY2 1190 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 TAGLN3Q9UI15 199 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 PNMA2Q9UL42 364 aa6.81□□□□□ -1.32
TM9SF3-202ENST00000443638 VSTM5A8MXK1 200 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 DCDC2CA8MYV0 355 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 TERTO14746 1132 aaKnown RBP6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 OPA1O60313 960 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 CENPBP07199 599 aaPredicted RBP6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 JMJD7P0C870 316 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 MAOBP27338 520 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 CABP4P57796 275 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 IRX6P78412 446 aaPredicted RBP6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 CTBSQ01459 385 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 C10orf62Q5T681 223 aaPredicted RBP6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 CLEC4GQ6UXB4 293 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 PI4K2BQ8TCG2 481 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 USP7Q93009 1102 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 WNT8BQ93098 351 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 KIFC2Q96AC6 838 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 ZNF837Q96EG3 531 aaPredicted RBP6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 CORO1BQ9BR76 489 aa6.8□□□□□ -1.32
TM9SF3-202ENST00000443638 PRAMEF27A3QJZ7 478 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 PRKD3O94806 890 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 TP53P04637 393 aaPredicted RBP6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 NTF4P34130 210 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 YARSP54577 528 aaKnown RBP6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 PIP4K2BP78356 416 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 GRB10Q13322 594 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 TCIRG1Q13488 830 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 POU4F3Q15319 338 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 ZRSR2Q15696 482 aaKnown RBP6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 NTRK3Q16288 839 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 ANKRD39Q53RE8 183 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 CDCA2Q69YH5 1023 aaPredicted RBP6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 ELMSAN1Q6PJG2 1045 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 KIF18BQ86Y91 864 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 MRPL41Q8IXM3 137 aaKnown RBP6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 IFNL3Q8IZI9 196 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 FAM13CQ8NE31 585 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 BVESQ8NE79 360 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 OR2W6PQ8NHA6 318 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 GMCL1Q96IK5 515 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 SARGQ9BW04 601 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 SLC13A1Q9BZW2 595 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 LUC7LQ9NQ29 371 aaKnown RBP6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 FAM86C1Q9NVL1 165 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 EMC9Q9Y3B6 208 aa6.79□□□□□ -1.32
TM9SF3-202ENST00000443638 TM4SF5O14894 197 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 FOSP01100 380 aaPredicted RBP6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 HTR3AP46098 478 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 ERVK-21P61565 698 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 PTSQ03393 145 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 TBC1D8BQ0IIM8 1120 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 C19orf57Q0VDD7 668 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 TMEM95Q3KNT9 176 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 CFAP100Q494V2 611 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 ZBTB37Q5TC79 503 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 C12orf40Q86WS4 652 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 TRIM59Q8IWR1 403 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 PTPRN2Q92932 1015 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 E2F7Q96AV8 911 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 TIFAQ96CG3 184 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 RCC1LQ96I51 464 aaKnown RBP6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 TMEM87BQ96K49 555 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 FGD4Q96M96 766 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 FBRSQ9HAH7 460 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 HIF3AQ9Y2N7 669 aa6.78□□□□□ -1.32
TM9SF3-202ENST00000443638 BLACEA4D250 179 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 SOBPA7XYQ1 873 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 ADARB2-AS1A8MUL3 147 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 M0R2C6 588 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 SHOXO15266 292 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 WDHD1O75717 1129 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 U2AF1L5P0DN76 240 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 KCNA6P17658 529 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 LIG1P18858 919 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 FLT3P36888 993 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 BAG6P46379 1132 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 AFF1P51825 1210 aaKnown RBP6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 POU5F1BQ06416 359 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 MAP4K2Q12851 820 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 GBX1Q14549 363 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 SKOR2Q2VWA4 1001 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 INO80DQ53TQ3 878 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 ACBD5Q5T8D3 534 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 DCAF15Q66K64 600 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 CYB5RLQ6IPT4 315 aa6.77□□□□□ -1.33
TM9SF3-202ENST00000443638 ZCCHC8Q6NZY4 707 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms